Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02861 ATGAGTAGCTCTTTCTTCTATAACCCGGATTTGGAAATGTTGCAACAAGATCCTACTAATATTCTCTTTGAATCATTTCATCATGACCCTTTTCATGATTCTCTTTCTTTTGACATGGTTGACCAACAAGGACAAACAAAAAATGAGACAAGTCAATCAGTGAAGAAGAATTCTGAAGCTAAAACAGTGTTGCAGAATAATAATAGTTATAAGATGGATAAAAAGATGTATATAGGTGTAAGAAAAAGACCTTGGGGGAAATATGCTGCAGAAATCAGAGACACAACAAGAGGTGGAAGAAGAGTTTGGCTTGGAACATTTGATAGTGCTGAAGATGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTAATAATGCTGTCATCAATTTTCCTGTTCAAAGGGTCAAAGAATCTTTGCAAGAGATTCAATATAAATGTAGAAAAGGGTCTTCACCTGCACTTGCACTCAAAGAGAGACACTATGAACAGAGAAAATTGTCATCAAAAGCTACAAAGATTAATAAAGCAGCGAAGTTACAAGAACCAGCAGAGGTATCATCATCATCATCATCATGTGTGTTGGTGTTAGAGGATTTGGGTGTTGAATATCTTGAACAACTTCTAAGTGTGTCTGATCAAACTACTAGCACCAGCAGCTAA 669 0.3632 MSSSFFYNPDLEMLQQDPTNILFESFHHDPFHDSLSFDMVDQQGQTKNETSQSVKKNSEAKTVLQNNNSYKMDKKMYIGVRKRPWGKYAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGNNAVINFPVQRVKESLQEIQYKCRKGSSPALALKERHYEQRKLSSKATKINKAAKLQEPAEVSSSSSSCVLVLEDLGVEYLEQLLSVSDQTTSTSS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02861 222 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Trre2g02861 222 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 CDD AP2 77 136 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Trre2g02861 222 Gene3D AP2/ERF domain 75 136 IPR036955 GO:0003700|GO:0006355
Trre2g02861 222 FunFam Ethylene-responsive transcription factor 2 75 136 - -
Trre2g02861 222 PANTHER DNA-BINDING DOMAIN 50 215 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02861 Trre-Chr2 25044596 25045264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02861 49 217 AP2-EREBP Transcription Factor Family AT3G23240 47.399 8.68e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Trre2g02861 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02861 K14516 - gmx:100812017 238.424