Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02845 ATGGCCAATAATGTTTTTCTATTATTCTTTGTGTTTTTATTTTTCGCATCAATAATTTCTTTGGTGTGTGATGCTATTAAAAGTGATGATGAAAGCAGTAAACTTTACATTGTATATATGGGCTCTCTTCCTAAAGAAGCATCATATTCTCCAACCTCTCACCATATTAGCTTGTTGCAACAAGTTATCGATGATAGTGACATACAAAATTGCTTAGTTCGAAGTTACAAGAGGAGTTTCAATGGTTTTGCCGTTATACTCAATGATCAACAAAGGATAAAACTTTCCGGCATGAGAGGTGTGATCTCAGTTTTTCCAAGTCAAGAGTACCACCTAAAAACCACAAGGTCGTGGGACTTCGTTGGTTTACCTCAATCAGCCAAACGGAGCAAAACTAATGAAAGTGATTTGGTGATCGGAGTCATAGATAGTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATATAGGTCTTGGTGCTATTCCAAAAAAGTGGAAAGGAGTTTGTGCAGGCGGACGTAACTTCAATTGTAACAAAAAGATTGTTGGAGCACGATTTTACGGTTTTAATGATGAGAGTGCAAGAGACTTAGAAGGTCATGGAACTCACACAGCGTCAACAGCTGGTGGAAGCAATGTGAAGGGTGCGAGCTTTAATGGTCTTGCAAAAGGAACTGCAAGAGGTGGAGTCCCATACTCAAGGATTGCTACATACAAAGTTTGCAACGATCAAGGACAATGCGATGGTCATGCTCTCTTATCTGCATTTGATGATGCCATTGCAGATGGAGTTGATGTCATTACCATATCTCTGGGTAGACCAGACATGATTGATTTTTTGAATGAACCTATTTCCATCGGTTCATTTCATGCCATGGAGAAGGGAATACTCACAGTGCAGGCTGCCGGAAACGATGGTCCTAGCCTAAGTACTGTTTCCAGTTTTGCACCTTGGTTATTCACTGTTGCTGCAACTACTATGGATCGTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAAGACGTTTATTGGTACGTCAATTAATATTTTCCCTTCAAATGGAACTAAATTTCCAATTGCCGTGCGTAATGCTCATGCTTGCTCTGCTGGAGGAAATGCATCCCCTGAAAAGTGTGATTGTATAGACAAAAATATGGTCAAGGGTAAACTTGTTTTATGCGGAGCACCCGGAGGTGAAAATTTCGCTTATGTCAATGGTGCAATTGGTTCGATCATTAATAGTACTAATATAGCTTCTATCACCGATAAGCCTTCACTTAACTTGGAAACAAAGGACTTTGTTCATGTTCAATCTTATACAAATTCCACCAAATATCCTGTAGCTGCAATTTTGAAGAGTGAGAGCTTCCATGACGCCAATGCTCCTAGAATTGCCTCTTTCTCTTCTCGTGGCCCAAATACCTTAGTTCTAGAAATTATGAAACCAGATGTAAGTGCCCCAGGAGTCAATATTTTAGCTGCATATCCACCTCAAAAATTATACTCAGATGTTATAGCGAAATACGCCCTATTATCTGGAACCTCTATGGCATGTCCTCACGTTGCTGGAGTTGTTGCATATGTGAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACCGCAAAACCGGTGAAAGGTACTTATGATGATTTGGCAGGTGAGTTTGCTTATGGTTCTGGGAATATCAATCCACAACAAGCCATTCACCCGGGACTTGTTTATGACATCTCTAAGGAAGATTATGTACAAATGCTTTGTAATTATGGGTATGATACTAACAAAATTAAACAAATTAGTGGAGATAACTCAAGTTGCGATGGACCTTCCAAAAGAGCCCTGGTGAAAGATATAAATTATCCGGCAATGGTGTTTCCTGTTAGGCCTTATCACAAGCGTTTCCATGTCAAGATTCATAGGACAGTCACAAATGTTGGTTTTCCAAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATTAAGGTGGAACCAAAACTGCTCTCATTTAAATCATTAAATGAGAAACAATCATTTGTTGTCACCGTTGTTGGAGGGGCAAAATTAAATGAAACTGTGTATTCCTCATCACTTGTATGGTCTGATGGTACCCACAATGTCAAGAGTCCCATCATTGTGCAAATACTTCTTTCAATATAA 2193 0.394 MANNVFLLFFVFLFFASIISLVCDAIKSDDESSKLYIVYMGSLPKEASYSPTSHHISLLQQVIDDSDIQNCLVRSYKRSFNGFAVILNDQQRIKLSGMRGVISVFPSQEYHLKTTRSWDFVGLPQSAKRSKTNESDLVIGVIDSGIWPESESFNDIGLGAIPKKWKGVCAGGRNFNCNKKIVGARFYGFNDESARDLEGHGTHTASTAGGSNVKGASFNGLAKGTARGGVPYSRIATYKVCNDQGQCDGHALLSAFDDAIADGVDVITISLGRPDMIDFLNEPISIGSFHAMEKGILTVQAAGNDGPSLSTVSSFAPWLFTVAATTMDRQFIDKLILGNGKTFIGTSINIFPSNGTKFPIAVRNAHACSAGGNASPEKCDCIDKNMVKGKLVLCGAPGGENFAYVNGAIGSIINSTNIASITDKPSLNLETKDFVHVQSYTNSTKYPVAAILKSESFHDANAPRIASFSSRGPNTLVLEIMKPDVSAPGVNILAAYPPQKLYSDVIAKYALLSGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYDDLAGEFAYGSGNINPQQAIHPGLVYDISKEDYVQMLCNYGYDTNKIKQISGDNSSCDGPSKRALVKDINYPAMVFPVRPYHKRFHVKIHRTVTNVGFPNSTYKATLIHHNPKIKIKVEPKLLSFKSLNEKQSFVVTVVGGAKLNETVYSSSLVWSDGTHNVKSPIIVQILLSI 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02845 730 Gene3D - 593 727 - -
Trre2g02845 730 Pfam Fibronectin type-III domain 624 724 IPR041469 -
Trre2g02845 730 SUPERFAMILY Subtilisin-like 5 658 IPR036852 GO:0004252|GO:0006508
Trre2g02845 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Trre2g02845 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Trre2g02845 730 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Trre2g02845 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 724 IPR045051 -
Trre2g02845 730 CDD Peptidases_S8_3 110 549 IPR034197 -
Trre2g02845 730 Gene3D Peptidase S8/S53 domain 136 589 IPR036852 GO:0004252|GO:0006508
Trre2g02845 730 Pfam Subtilase family 135 566 IPR000209 GO:0006508|GO:0008236
Trre2g02845 730 FunFam Subtilisin-like protease SBT1.5 136 337 - -
Trre2g02845 730 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Trre2g02845 730 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Trre2g02845 730 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre2g02845 730 ProSiteProfiles Serine proteases, subtilase domain profile. 117 576 - -
Trre2g02845 730 CDD PA_subtilisin_like 335 451 - -
Trre2g02845 730 Gene3D - 328 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02845 Trre-Chr2 24762968 24766321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02845 28 724 Subtilisin-like Serine Gene Family AT5G59120 51.836 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02845 - - psat:127076787 874.004