Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02834 ATGGTTTCCACTATTACGTGGATTCGCTACCTTAAATCCAAAGCTCAATACTCTCTCGCTCTCGGATACAAGAACCATAAAGGAGGTCATGTCAAAGATAATGAGCTAACAGATTTTCTTTTCAAGCACTTCTGGCATGGAAAGATGACCTTCTTGCACTGGAATAAAGGAGAAGAGATGGCTCCTATTATTTCTGGAAAAGGAGCAACTCTTCTTGTTCGGAGAATACCAATTCCAGACCCAAGACATGTTTATGTAGGAGATGTTGTGGTCTTGAAGAACCCTGAAAAGCCAGAGGACTATCTAGTCAGAAGATTAGCTGCGACCGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGATCAATCTTTTGTTCTTGACAAGGGTGAATGTTGGGTAGTGTCTGAAAATGCAAAATTGAAAGCCAAGGAAGCAATTGATAGCCGAACATTTGGTCCAGTTCACATGACCAACATTGTAGGCAGAGTCCTATACTGCCTGCGAAATGCTGTAGACCATGGTCGTGTACAGAACAGTCCTTTCAGCATGCAAAACGATTCACCAGTGTTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAGAGTCACAAAGCCTGA 618 0.4223 MVSTITWIRYLKSKAQYSLALGYKNHKGGHVKDNELTDFLFKHFWHGKMTFLHWNKGEEMAPIISGKGATLLVRRIPIPDPRHVYVGDVVVLKNPEKPEDYLVRRLAATEGYEMASTDEKDQSFVLDKGECWVVSENAKLKAKEAIDSRTFGPVHMTNIVGRVLYCLRNAVDHGRVQNSPFSMQNDSPVLEVELDVDEMAKSHKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02834 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Trre2g02834 205 Gene3D Umud Fragment, subunit A 48 179 - -
Trre2g02834 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
Trre2g02834 205 SUPERFAMILY LexA/Signal peptidase 57 175 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02834 Trre-Chr2 24596545 24601683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02834 60 180 MADS-box Gene Family AT1G29960 28.906 1.26e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02834 - - ahf:112738901 306.99