Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02821 ATGGCGATCGAAAAACAACAACAAGAGAATGAAAATTCCGGTGGAATCCAAGTCCAAGGAATGCAATTCTCCTACGACGGACTTCAACAACAACCACCGCTTTTCCTCGATTTCAACCTTCACGTCTCTCCCGGATCTCGTTGCCTCCTCGTCGGTGCTAATGGATCCGGGAAAACGACTTTGTTGAAGATTTTGGCTGGGAAGCATATGGTTGGAGGAAGAGACGTTGTCCGTGTGTTGAATTGTTCTGCTTTTCATGATACTCAGCTTGTTTGTAGTGGAGATCTTGCTTATTTGGGTGGATGTTGGAGTAAAAACGTTGGCTGTGCTGGAGACATTCCACTCCAGGGAGACTTCTCTGCTGAACATATGATATTCGGTGTCGAAGGTGTTGATCCTGACAGGAGAGACAAGTTGATTGACCTGCTCGATATAGATTTGCAGTGGCGAATGCATAAGGTATCCGATGGCCAGCGGCGTCGAGTGCAAATCTGTCTAGGTCTTCTTCATCCGTACAAGGTTCTCTTGCTGGATGAGGTTACAGTTGACCTGGATGTTGTTACTCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAGCAGAGGGAAGCTACAATTGTATATGCCACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATATATACAAGAAGGCGAACTAAGGAGAGCAGAAAAAATATCAGATGTTAACGAGTTGAAATCTTCAACTAATCTGCTCTCTGTTGTTGAGTCGTGGCTCCGTGCTGAAACAAAGGTTGAAAAGAAGAAACCTGTCAACAATACATCTCAGGCGAATCCTTTTGCTAGCTCTCCATTCTTTTCATCCAGACACATGGCATACTATCGATAG 885 0.4429 MAIEKQQQENENSGGIQVQGMQFSYDGLQQQPPLFLDFNLHVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTQLVCSGDLAYLGGCWSKNVGCAGDIPLQGDFSAEHMIFGVEGVDPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKISDVNELKSSTNLLSVVESWLRAETKVEKKKPVNNTSQANPFASSPFFSSRHMAYYR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02821 294 Gene3D - 14 275 IPR027417 -
Trre2g02821 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 243 IPR027417 -
Trre2g02821 294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 16 254 IPR003439 GO:0005524
Trre2g02821 294 Pfam ABC transporter 37 69 IPR003439 GO:0005524
Trre2g02821 294 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 16 255 - -
Trre2g02821 294 FunFam ABC transporter I family member 21 119 289 - -
Trre2g02821 294 SMART AAA_5 44 230 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02821 Trre-Chr2 24414091 24417832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02821 14 208 Calmodulin-binding Proteins AT2G36910 21.359 1.02e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02821 K12608 - gmx:100788503 483.026