Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02820 | ATGGATTCTGCGAGGAGTTGGCTTCAGAAGTTGCAGCCTCGTGATAAAATGAAGGCAAAGAAGAGGGATGAAGATGGTAATAATGATGAAGAAGGAGATTTGACATCACCTGTCGATGATGCGTTGCTTTCTGATGTCACGAAACAGAAGGTTTCCGCGGCAAAGCAGTATATTGAAAATCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAAGAGGATCAAAGCAACTTGCTTAAGTTTTTAGAGAAAAAGGAAACCGAATATATGCGCCTTCAGAGGGCCAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGAAAGGGTGCATTTGGAGAGGTCAGAGTCTGCAGAGAGAAGACTACTGATCATGTATACGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACACGTCAAAGCGGAAAGGAATCTCCTCGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTATTCTTTCCAGGATGAGGAGTATCTTTATCTTATTATGGAGTATCTACCGGGTGGAGATATGATGACTCTACTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTTGGAGAAACTGTTCTGGCTATTGAATCTATACACGAGCACAATTATATACACAGGGATATCAAGCCTGACAACTTATTACTTGATAGATATGGACACTTGAGACTTTCTGACTTTGGACTTTGTAAACCGTTAGATTGTAGTCAGCTTGAAGAAAAGGATTTTTCTGTCGGTCAGAATGCGAATGGATCTACACATAATGAGGCCAGTTCAACTCCAAAACGCTCACAACAAGAACAACTGCAAAACTGGCAAAAGAACAGGAGGACACTTGCTTATTCCACAGTTGGTACACCGGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGGTATGGGATGGAATGTGATTGGTGGTCACTCGGTGCTATCATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGACAACATGTAGGAAGATAGTGAACTGGAAATCTCACTTGAAATTTCCTGAGGAAGCTGGGCTATCGCCAGATGCTAAAGATCTTATTAGTAGACTTTTATGTAATGTCAATCATAGGCTGGGATCAAAAGGTGCTGATGAAATAAAGGCTCATCGGTTCTTCAATGGTGTTGAATGGGATAAACTGTATCATATTGAAGCTGCATTTATACCTGAGGTCAATGATGAATTAGATACTCAGAATTTTGAAAAGTTCGATGAGGCTGACTTCGAAACTCGACCGTCATCAAAAGCCGGTCCATGGAGGAAGATGATTTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAGCGATTATCAAGTTCCTGGGATGGCTGAACTGAAGAAGAAACCCTCCAAATCAAAGAGACCATCCATTAAGTCGCTTTTTGATTCCGATTCAGAGGTGTCTGAGGTTTCTGATACATCTGCAAGTGATCGACCTGCTCAAGGAAGCTTTTTAAACCTCTTGCCGCCCAAGTTAGAGCCATCTCCTAGCGAGAGGAATCTTACTCATAAGTCCTAA | 1677 | 0.4079 | MDSARSWLQKLQPRDKMKAKKRDEDGNNDEEGDLTSPVDDALLSDVTKQKVSAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQSNLLKFLEKKETEYMRLQRAKMGVDDFELLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHEHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSQLEEKDFSVGQNANGSTHNEASSTPKRSQQEQLQNWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKSHLKFPEEAGLSPDAKDLISRLLCNVNHRLGSKGADEIKAHRFFNGVEWDKLYHIEAAFIPEVNDELDTQNFEKFDEADFETRPSSKAGPWRKMISSKDLNFVGYTYKNFEIVSDYQVPGMAELKKKPSKSKRPSIKSLFDSDSEVSEVSDTSASDRPAQGSFLNLLPPKLEPSPSERNLTHKS | 558 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02820 | 558 | Gene3D | Transferase(Phosphotransferase) domain 1 | 204 | 436 | - | - | |
Trre2g02820 | 558 | FunFam | Non-specific serine/threonine protein kinase | 317 | 436 | - | - | |
Trre2g02820 | 558 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 419 | 491 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | CDD | STKc_NDR_like | 118 | 482 | - | - | |
Trre2g02820 | 558 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 149 | IPR017441 | GO:0005524 | |
Trre2g02820 | 558 | MobiDBLite | consensus disorder prediction | 501 | 558 | - | - | |
Trre2g02820 | 558 | CDD | MobB_NDR_LATS-like | 54 | 115 | - | - | |
Trre2g02820 | 558 | ProSiteProfiles | Protein kinase domain profile. | 120 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | SMART | serkin_6 | 120 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 466 | IPR011009 | - | |
Trre2g02820 | 558 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g02820 | 558 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 447 | - | - | |
Trre2g02820 | 558 | MobiDBLite | consensus disorder prediction | 514 | 534 | - | - | |
Trre2g02820 | 558 | Pfam | Protein kinase domain | 121 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | MobiDBLite | consensus disorder prediction | 9 | 28 | - | - | |
Trre2g02820 | 558 | FunFam | Non-specific serine/threonine protein kinase | 204 | 271 | - | - | |
Trre2g02820 | 558 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 31 | 475 | - | - | |
Trre2g02820 | 558 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Trre2g02820 | 558 | FunFam | Non-specific serine/threonine protein kinase | 91 | 203 | - | - | |
Trre2g02820 | 558 | Pfam | Protein kinase C terminal domain | 437 | 481 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | MobiDBLite | consensus disorder prediction | 280 | 306 | - | - | |
Trre2g02820 | 558 | SMART | pkinase_C_6 | 419 | 483 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Trre2g02820 | 558 | Coils | Coil | 62 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02820 | Trre-Chr2 | 24402835 | 24411410 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02820 | 1 | 516 | AGC Kinase Gene Family | AT2G20470 | 77.927 | 0.0 | 833 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_NDR | Trre2g02820 | Pkinase | 5.6e-63 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02820 | K08790 | - | gmx:100820558 | 940.643 |