Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02808 ATGGTCCAAGGGAGTGATTTCACCATTGGCAAAGGAAGAGGTGGAGAATCAATCTATGGCGATAACTTTGCTGATGAAAACTTCAAGCTGAAGCATATTGGGCCAGGATACTATCAAATCAAATCATCATCTGGACCGAAATACTATCAAATTAAATATGTTATGATAGTCACTAGACTAAAATATAAGTTAGAAGGGAAGTATTATGAGGGAAGAAAAAGTGTAGTAAGATATTGCACTAATGGCTGA 249 0.3614 MVQGSDFTIGKGRGGESIYGDNFADENFKLKHIGPGYYQIKSSSGPKYYQIKYVMIVTRLKYKLEGKYYEGRKSVVRYCTNG 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02808 82 Gene3D - 1 76 IPR029000 -
Trre2g02808 82 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 67 - -
Trre2g02808 82 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 82 IPR002130 GO:0000413|GO:0003755
Trre2g02808 82 SUPERFAMILY Cyclophilin-like 1 54 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02808 Trre-Chr2 24244963 24247495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02808 1 63 U-box Gene Family AT5G67530 43.284 3.13e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02808 K01802 - fve:101302786 73.559