Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02787 | ATGCAACTCAAAACTCAGTTTTTCTTCTTCTGTTGCATTTGCTCTTTCCCTTATAGCTTTTATGCTGCAGAAAATAATGAAGTATCTGCTTTACTTGCTATAAAAGCCGGTCTCATTGATCCGTTGAATAGCCTACATGATTGGAAGGATGATGATGCAGGTGCCGCTCGAGCTCATTGTAACTGGACTGGTGTCAAGTGCAATGCAGCAGGAGCTGTTGAGAAGCTTGATATCTCTCACATGAATCTGAGTGGAAGTGTCTCCAATGAGATACAAAGTTTAAAAAGTTTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTTTCAAAGAACATAACCAATCTTGCCTTGCTAAAGAGCCTCGACGTAAGCCAGAATTTCTTCACCGGCGCCTTTCCATTAGGCCTTGGAAAGGTGGCATCGGAACTTGTTACCTTGAATGCATCAAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATATCTCTTCCTTAGAGATACTTGATCTTAGAGGCAGCTTCTTTGAAGGTTCTATTCCAAAATCCATTTGTAACTTGAGTAAGTTGAAATTCCTTGGTTTATCTGGGAATAATCTGACCGGGAAGATTCCGGTTGAGATTGGAAAACTTTCGTCACTGGAGTCTATGATCATCGGTTATAACGAATTTAAAGGTGGCATTCCAAAAGAGTTTGGGAATTTAACCAAGCTGAAGTATCTTGATTTAGCAGAAGGCAAGTTTGGTGGTGAAATTCCTGATGAGTTGGGAAAACTCGAGTTATTGAACACAGTTTTCTTATACAAGAACAGTTTTGAAGGAAAAATTCCACCAACGATTGGCAACATGACTTCATTGGTGTTGCTTGATCTGTCAGACAACATGTTATCGGGAAATATTCCGGCCGAAATAAGTCAGCTGAAGAATTTGCAGCTTTTGAACTTCATGAGGAACAAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTGCATCAACTGGAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTGACCTCGGCAAGAATTCGCCGTTGCAGTGGTTGGATGTATCGTCCAATTCACTCTCTGGCGAGATTCCAGAAACAATTTGCACTAAGGGCAATCTCACCAAGCTTATACTTTTCAACAATACCTTCAAGGGTCCAATTCCAACAAGCCTATCAAAATGTCCTTCACTCATTCGCGTTCGGATTCAAAACAATCTTCTTTCTGGTACAATTCCTGTTGGTTTTGGTAAGCTTGAGAAGCTTCAGAGGCTAGAATTGGCTAACAATAGTCTCACCGGTGGAATTCCGGACGACATTGCTTCTTCCACATCTCTTTCATTCATTGATTTTTCCAGAAACAAACTCCACTCTTCTATTCCTTCCACTGTTATTTCAATTCCAAATCTGCAAACATTCATAGTCTCCGAAAACAACCTGGAAGGTGATATTCCCGACCAATTCCAGGACTGTCCATCACTTGGAGTCCTGGATCTCTCGTCTAACCTTTTCTCTGGAATCATTCCAGCAAGCATTGCTTCGTGTCAGAAATTGGTAAAATTGAGCCTACAAAACAACCAATTGACTGGTAGCATCCCAAAAGCAATAACAAGCATGCCTACATTGTCCATTCTTGATCTTTCTAACAACTCTTTAACTGGTCAGATACCTGATAACTTTGGTATGTCTCCGGCTTTGGAAACATTCAATGTCTCATACAACAAGCTAGAAGGTCCTGTTCCGGAAAATGGAATGCTAAGAGCGTTAAATCCAAACGATCTTGTGGGAAACGCAGGCCTATGTGGTGGTTTCTTTCCTCCATGTGGAAAAACCTCAGCATATTCATTAAGGCGCGGAAGCTCACATGGAAAGCGTATAATTGTAGGATGGATAATTGGACTATCATCAATCTTAGCCATTGGAGTTGCTGTTTTGGTAGCTAGATCTATATACATGAAGTGGTACACGGAAGGATTATGCTTCCAAGGAAGATTTTATGGAGGTAGCAAGGGATGGCCTTGGAGATTGATGGCATTTCAGAGACTCGATTTTACCAGTACTGATATCTTATCCTGCATCAAGGAAACAAATGTGATAGGCATGGGAGCGACCGGGGTCGTTTATAAGGCCGAGGTACCACAATCAAGTACAATCGTGGCAGTAAAAAAATTGTGGAAATCAGGATCTGATGTTGAAGTAGGAAGTAGTGATGATCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAAACTACTAGGGTTTCTTTATAATGACACTGATGTGATGATAGTGTATGAATTTATGCTCAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAATCAGAGAGATTGCTTGTAGACTGGGTATCACGGTATAACATAGCTCTAGGAGTCGCACAAGGACTCGCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCGAGACATCAAGTCGAATAATATACTGCTTGATGCAAATCTTGACGCAAGGATAGCAGATTTCGGATTAGCCAAGATGATGATCCGTAAGGATGAAACTGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCCTTGAAGGTAGATGAAAAGATTGACATTTACAGCTTTGGAATAGTTCTGTTGGAGCTTATAACAGGAAAGCGGCCGATAGATCCGGAGTTTGGAGAATCTGTAGACATTGTAGGGTGGATAAGAAGGAAGATAGACAAAAATTCTCCAGAAGAGGCATTAGACCCAAGTGTAGGAAACTGTAAACATGTTCAAGAGGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGCTACCTAAAGACAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAGCCTCGGAGAAAAAGTGTTAGGAACAAAGAGATGACAGTAATTAGCACATCATCAGTTAATGGCCTTTAG | 3021 | 0.4138 | MQLKTQFFFFCCICSFPYSFYAAENNEVSALLAIKAGLIDPLNSLHDWKDDDAGAARAHCNWTGVKCNAAGAVEKLDISHMNLSGSVSNEIQSLKSLTFLNLCCNGFESSLSKNITNLALLKSLDVSQNFFTGAFPLGLGKVASELVTLNASSNNFSGFLPEDLGNISSLEILDLRGSFFEGSIPKSICNLSKLKFLGLSGNNLTGKIPVEIGKLSSLESMIIGYNEFKGGIPKEFGNLTKLKYLDLAEGKFGGEIPDELGKLELLNTVFLYKNSFEGKIPPTIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLHQLEVLELWNNSLSGPLPSDLGKNSPLQWLDVSSNSLSGEIPETICTKGNLTKLILFNNTFKGPIPTSLSKCPSLIRVRIQNNLLSGTIPVGFGKLEKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNKLHSSIPSTVISIPNLQTFIVSENNLEGDIPDQFQDCPSLGVLDLSSNLFSGIIPASIASCQKLVKLSLQNNQLTGSIPKAITSMPTLSILDLSNNSLTGQIPDNFGMSPALETFNVSYNKLEGPVPENGMLRALNPNDLVGNAGLCGGFFPPCGKTSAYSLRRGSSHGKRIIVGWIIGLSSILAIGVAVLVARSIYMKWYTEGLCFQGRFYGGSKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEVPQSSTIVAVKKLWKSGSDVEVGSSDDLVGEVNLLGRLRHRNIVKLLGFLYNDTDVMIVYEFMLNGNLGDALHGKQSERLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLDARIADFGLAKMMIRKDETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPEFGESVDIVGWIRRKIDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSVRNKEMTVISTSSVNGL | 1006 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02787 | 1006 | PANTHER | UNNAMED PRODUCT | 169 | 914 | - | - | |
Trre2g02787 | 1006 | Gene3D | Phosphorylase Kinase; domain 1 | 705 | 789 | - | - | |
Trre2g02787 | 1006 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 24 | 178 | - | - | |
Trre2g02787 | 1006 | SUPERFAMILY | L domain-like | 59 | 319 | - | - | |
Trre2g02787 | 1006 | Pfam | Leucine rich repeat N-terminal domain | 25 | 68 | IPR013210 | - | |
Trre2g02787 | 1006 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 364 | 624 | - | - | |
Trre2g02787 | 1006 | SUPERFAMILY | Protein kinase-like (PK-like) | 697 | 980 | IPR011009 | - | |
Trre2g02787 | 1006 | Gene3D | Ribonuclease Inhibitor | 331 | 627 | IPR032675 | - | |
Trre2g02787 | 1006 | Gene3D | Ribonuclease Inhibitor | 231 | 330 | IPR032675 | - | |
Trre2g02787 | 1006 | Pfam | Leucine rich repeat | 480 | 540 | IPR001611 | GO:0005515 | |
Trre2g02787 | 1006 | Gene3D | Ribonuclease Inhibitor | 26 | 144 | IPR032675 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 335 | 359 | IPR003591 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 551 | 574 | IPR003591 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 287 | 311 | IPR003591 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 191 | 215 | IPR003591 | - | |
Trre2g02787 | 1006 | SMART | LRR_typ_2 | 431 | 455 | IPR003591 | - | |
Trre2g02787 | 1006 | ProSitePatterns | Protein kinases ATP-binding region signature. | 711 | 735 | IPR017441 | GO:0005524 | |
Trre2g02787 | 1006 | SMART | serkin_6 | 705 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02787 | 1006 | FunFam | MDIS1-interacting receptor like kinase 1 | 705 | 789 | - | - | |
Trre2g02787 | 1006 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 832 | 844 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g02787 | 1006 | Pfam | Protein kinase domain | 707 | 976 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02787 | 1006 | SUPERFAMILY | RNI-like | 255 | 595 | - | - | |
Trre2g02787 | 1006 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 179 | 279 | - | - | |
Trre2g02787 | 1006 | ProSiteProfiles | Protein kinase domain profile. | 705 | 987 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02787 | 1006 | Gene3D | Ribonuclease Inhibitor | 145 | 230 | IPR032675 | - | |
Trre2g02787 | 1006 | FunFam | MDIS1-interacting receptor like kinase 1 | 790 | 998 | - | - | |
Trre2g02787 | 1006 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 280 | 363 | - | - | |
Trre2g02787 | 1006 | Pfam | Leucine Rich Repeat | 169 | 191 | IPR001611 | GO:0005515 | |
Trre2g02787 | 1006 | Gene3D | Transferase(Phosphotransferase) domain 1 | 790 | 1004 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02787 | Trre-Chr2 | 24069420 | 24072626 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02787 | 1 | 990 | Receptor kinase-like Gene Family | AT1G08590 | 60.669 | 0.0 | 1166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre2g02787 | Pkinase | 9.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02787 | - | - | gmx:100788430 | 1683.31 |