Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02787 ATGCAACTCAAAACTCAGTTTTTCTTCTTCTGTTGCATTTGCTCTTTCCCTTATAGCTTTTATGCTGCAGAAAATAATGAAGTATCTGCTTTACTTGCTATAAAAGCCGGTCTCATTGATCCGTTGAATAGCCTACATGATTGGAAGGATGATGATGCAGGTGCCGCTCGAGCTCATTGTAACTGGACTGGTGTCAAGTGCAATGCAGCAGGAGCTGTTGAGAAGCTTGATATCTCTCACATGAATCTGAGTGGAAGTGTCTCCAATGAGATACAAAGTTTAAAAAGTTTAACTTTTTTAAACTTGTGCTGCAATGGATTTGAGTCATCACTTTCAAAGAACATAACCAATCTTGCCTTGCTAAAGAGCCTCGACGTAAGCCAGAATTTCTTCACCGGCGCCTTTCCATTAGGCCTTGGAAAGGTGGCATCGGAACTTGTTACCTTGAATGCATCAAGCAACAATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATATCTCTTCCTTAGAGATACTTGATCTTAGAGGCAGCTTCTTTGAAGGTTCTATTCCAAAATCCATTTGTAACTTGAGTAAGTTGAAATTCCTTGGTTTATCTGGGAATAATCTGACCGGGAAGATTCCGGTTGAGATTGGAAAACTTTCGTCACTGGAGTCTATGATCATCGGTTATAACGAATTTAAAGGTGGCATTCCAAAAGAGTTTGGGAATTTAACCAAGCTGAAGTATCTTGATTTAGCAGAAGGCAAGTTTGGTGGTGAAATTCCTGATGAGTTGGGAAAACTCGAGTTATTGAACACAGTTTTCTTATACAAGAACAGTTTTGAAGGAAAAATTCCACCAACGATTGGCAACATGACTTCATTGGTGTTGCTTGATCTGTCAGACAACATGTTATCGGGAAATATTCCGGCCGAAATAAGTCAGCTGAAGAATTTGCAGCTTTTGAACTTCATGAGGAACAAGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTGCATCAACTGGAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTGACCTCGGCAAGAATTCGCCGTTGCAGTGGTTGGATGTATCGTCCAATTCACTCTCTGGCGAGATTCCAGAAACAATTTGCACTAAGGGCAATCTCACCAAGCTTATACTTTTCAACAATACCTTCAAGGGTCCAATTCCAACAAGCCTATCAAAATGTCCTTCACTCATTCGCGTTCGGATTCAAAACAATCTTCTTTCTGGTACAATTCCTGTTGGTTTTGGTAAGCTTGAGAAGCTTCAGAGGCTAGAATTGGCTAACAATAGTCTCACCGGTGGAATTCCGGACGACATTGCTTCTTCCACATCTCTTTCATTCATTGATTTTTCCAGAAACAAACTCCACTCTTCTATTCCTTCCACTGTTATTTCAATTCCAAATCTGCAAACATTCATAGTCTCCGAAAACAACCTGGAAGGTGATATTCCCGACCAATTCCAGGACTGTCCATCACTTGGAGTCCTGGATCTCTCGTCTAACCTTTTCTCTGGAATCATTCCAGCAAGCATTGCTTCGTGTCAGAAATTGGTAAAATTGAGCCTACAAAACAACCAATTGACTGGTAGCATCCCAAAAGCAATAACAAGCATGCCTACATTGTCCATTCTTGATCTTTCTAACAACTCTTTAACTGGTCAGATACCTGATAACTTTGGTATGTCTCCGGCTTTGGAAACATTCAATGTCTCATACAACAAGCTAGAAGGTCCTGTTCCGGAAAATGGAATGCTAAGAGCGTTAAATCCAAACGATCTTGTGGGAAACGCAGGCCTATGTGGTGGTTTCTTTCCTCCATGTGGAAAAACCTCAGCATATTCATTAAGGCGCGGAAGCTCACATGGAAAGCGTATAATTGTAGGATGGATAATTGGACTATCATCAATCTTAGCCATTGGAGTTGCTGTTTTGGTAGCTAGATCTATATACATGAAGTGGTACACGGAAGGATTATGCTTCCAAGGAAGATTTTATGGAGGTAGCAAGGGATGGCCTTGGAGATTGATGGCATTTCAGAGACTCGATTTTACCAGTACTGATATCTTATCCTGCATCAAGGAAACAAATGTGATAGGCATGGGAGCGACCGGGGTCGTTTATAAGGCCGAGGTACCACAATCAAGTACAATCGTGGCAGTAAAAAAATTGTGGAAATCAGGATCTGATGTTGAAGTAGGAAGTAGTGATGATCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAAACTACTAGGGTTTCTTTATAATGACACTGATGTGATGATAGTGTATGAATTTATGCTCAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAATCAGAGAGATTGCTTGTAGACTGGGTATCACGGTATAACATAGCTCTAGGAGTCGCACAAGGACTCGCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCGAGACATCAAGTCGAATAATATACTGCTTGATGCAAATCTTGACGCAAGGATAGCAGATTTCGGATTAGCCAAGATGATGATCCGTAAGGATGAAACTGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCCTTGAAGGTAGATGAAAAGATTGACATTTACAGCTTTGGAATAGTTCTGTTGGAGCTTATAACAGGAAAGCGGCCGATAGATCCGGAGTTTGGAGAATCTGTAGACATTGTAGGGTGGATAAGAAGGAAGATAGACAAAAATTCTCCAGAAGAGGCATTAGACCCAAGTGTAGGAAACTGTAAACATGTTCAAGAGGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGCTACCTAAAGACAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAGCCTCGGAGAAAAAGTGTTAGGAACAAAGAGATGACAGTAATTAGCACATCATCAGTTAATGGCCTTTAG 3021 0.4138 MQLKTQFFFFCCICSFPYSFYAAENNEVSALLAIKAGLIDPLNSLHDWKDDDAGAARAHCNWTGVKCNAAGAVEKLDISHMNLSGSVSNEIQSLKSLTFLNLCCNGFESSLSKNITNLALLKSLDVSQNFFTGAFPLGLGKVASELVTLNASSNNFSGFLPEDLGNISSLEILDLRGSFFEGSIPKSICNLSKLKFLGLSGNNLTGKIPVEIGKLSSLESMIIGYNEFKGGIPKEFGNLTKLKYLDLAEGKFGGEIPDELGKLELLNTVFLYKNSFEGKIPPTIGNMTSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLHQLEVLELWNNSLSGPLPSDLGKNSPLQWLDVSSNSLSGEIPETICTKGNLTKLILFNNTFKGPIPTSLSKCPSLIRVRIQNNLLSGTIPVGFGKLEKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNKLHSSIPSTVISIPNLQTFIVSENNLEGDIPDQFQDCPSLGVLDLSSNLFSGIIPASIASCQKLVKLSLQNNQLTGSIPKAITSMPTLSILDLSNNSLTGQIPDNFGMSPALETFNVSYNKLEGPVPENGMLRALNPNDLVGNAGLCGGFFPPCGKTSAYSLRRGSSHGKRIIVGWIIGLSSILAIGVAVLVARSIYMKWYTEGLCFQGRFYGGSKGWPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEVPQSSTIVAVKKLWKSGSDVEVGSSDDLVGEVNLLGRLRHRNIVKLLGFLYNDTDVMIVYEFMLNGNLGDALHGKQSERLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLDARIADFGLAKMMIRKDETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPIDPEFGESVDIVGWIRRKIDKNSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSVRNKEMTVISTSSVNGL 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02787 1006 PANTHER UNNAMED PRODUCT 169 914 - -
Trre2g02787 1006 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Trre2g02787 1006 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 24 178 - -
Trre2g02787 1006 SUPERFAMILY L domain-like 59 319 - -
Trre2g02787 1006 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Trre2g02787 1006 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Trre2g02787 1006 SUPERFAMILY Protein kinase-like (PK-like) 697 980 IPR011009 -
Trre2g02787 1006 Gene3D Ribonuclease Inhibitor 331 627 IPR032675 -
Trre2g02787 1006 Gene3D Ribonuclease Inhibitor 231 330 IPR032675 -
Trre2g02787 1006 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Trre2g02787 1006 Gene3D Ribonuclease Inhibitor 26 144 IPR032675 -
Trre2g02787 1006 SMART LRR_typ_2 94 118 IPR003591 -
Trre2g02787 1006 SMART LRR_typ_2 335 359 IPR003591 -
Trre2g02787 1006 SMART LRR_typ_2 551 574 IPR003591 -
Trre2g02787 1006 SMART LRR_typ_2 287 311 IPR003591 -
Trre2g02787 1006 SMART LRR_typ_2 191 215 IPR003591 -
Trre2g02787 1006 SMART LRR_typ_2 431 455 IPR003591 -
Trre2g02787 1006 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Trre2g02787 1006 SMART serkin_6 705 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02787 1006 FunFam MDIS1-interacting receptor like kinase 1 705 789 - -
Trre2g02787 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Trre2g02787 1006 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02787 1006 SUPERFAMILY RNI-like 255 595 - -
Trre2g02787 1006 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Trre2g02787 1006 ProSiteProfiles Protein kinase domain profile. 705 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02787 1006 Gene3D Ribonuclease Inhibitor 145 230 IPR032675 -
Trre2g02787 1006 FunFam MDIS1-interacting receptor like kinase 1 790 998 - -
Trre2g02787 1006 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Trre2g02787 1006 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515
Trre2g02787 1006 Gene3D Transferase(Phosphotransferase) domain 1 790 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02787 Trre-Chr2 24069420 24072626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02787 1 990 Receptor kinase-like Gene Family AT1G08590 60.669 0.0 1166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre2g02787 Pkinase 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02787 - - gmx:100788430 1683.31