Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02766 ATGTCAACTTCACTTATCATCTTTTTCGCTTTGGTTCACCTGCTACTTTACTCTTCCTCAGCGGGGTTGATTTCTATGAGTTTGTCATTTGCTTCGTCCGAACCAGCCATAGTGTGGTTTTTTAAACCTTCTTCCGGGCCATCTTCTGATCCTGTGCCATCTCCAATGTTTGAAGGTCGTAGTGTGACTCAAGGACAGAAAAAACATCCTCATCATCACAGTCATCCCCCTCGCGCGAAACCTTATGCTGTCGCTCCCTCCCCTTCTGAAAGCCAAGCATGTGGCCTAAGCTGTAGGGATCCACTCACAGAAACTTCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCGGACTTTTATTGGATACAGCTTCTTTGGCTGTTTTTCCGGTAGTTAACGAGTTAGAGGTTGAACTTGCATCTGGAACATATTTGAAGCATAGCCAGGTGAGGATAATGGGTGTTAGTGCTGACATTCAAAATCAAGGAAGAACTGTAGTTGATATTGACCTGGTTCCGCTTAGTGAGAAATTTGACAATAAGACTGTGGTTCTGATATCCCGAAGATTTTCGCACAAGAAAATTCATCTAAATAGGAGTCTTTTTGGTGATTACACACTCTTGTACATTACTTATCAAGTATCAGGGATGTCACCATTGCTGCCACATGGAACATCAACTGGGAGTGGTCCCCTTCCCAGTGGAAATACTTCAGGTCTCCCATTCACGGCCAACTTTACCAGTGGCAGGAAGAACGAGGAAATGAGTCTTAGAACCATAATCATCGTTGCTGTATCTTCCGTTATAGTCTCGTTGGGCATGGTTGGAATCTTTTACATCATTTTTAAATGGAGGAAAACCAGGAGACCATCAAGTGATCTTGACCTGCAATTCACATTGTCTCCAAACATGAGATCTGTCATGGGGCCTATGTTGTGTAGCAGAATGACAAGCTCAACATCAGTGTCCCATATGTCCACCATGGATACTTCTGCTCTTTCTGTGAAAACATTTTCCCTTTCTGAAATTGAGAAAGCAACAGATAGGTTCAGTTCACAAAGAGTTTTGGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGAGATTAAATGATGGAACTGATGTTGCAGTTAAGCTGCTAACAAGGGATATTCAGCAAAGTGGAGACCGTGAATTTACTGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAACTCATCGGTATATGCACAGAAGGGCACATACGATGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAATCTCATTTGCATGGTGTTGACCAGAGAAATAACCCTCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCTGCAAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCTCATGTGATCCACCGAGACTTCAAAGCTAGCAACGTGTTGTTAGAAGACGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCATCCTGTTCCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACGGGCCATTTGCTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTAACCGGAAGAAAGCCAGTGGACATGTCTCAACCTGTTGGAGAGGAGAATCTCGTAGTATGGGCACGGCCACTGTTGAAAAGTAGAGAGGGTTTAGAACGGCTGGTGGATCCGACATTGGCTGGAACTTATGACTTCGATGAAATGGCAAAGGTTGCTGCTATTGCTTCATCGTGTGTAAACCTGGAGGTCACTCATAGACCCTTCATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATTCAATGACAATGACGATGCCGATTACTACAGCCAAAAGGAATCTTCTGGTCAAGAGTCTGATTTTAGAGGCAACCTTTCTGATAGCAGTGCGTGGTATGATGAGCCTGAAGATATAACATGTCGCCTAGATTTTAGGCCAACATTAGCATCTACTATCATCACAATGGATTACAGTTCTGGTCCACTTGATGTACTGGAAAACAGACAGTTTGCAGGTTCAACCTATATGGGAGATGATATGTCTTTACCAATTAGACTTGGGAATAGTTCAGGTCCCTTGAGAACAGCCCGACGAAGCAACCTATCCTTTTATAGGCTTACTGGTAGTCAGAGTGATCATGGAGTATTTCCTTCCAAGCGCGTTTGA 2253 0.4363 MSTSLIIFFALVHLLLYSSSAGLISMSLSFASSEPAIVWFFKPSSGPSSDPVPSPMFEGRSVTQGQKKHPHHHSHPPRAKPYAVAPSPSESQACGLSCRDPLTETSFGSPCGCVFPMKVGLLLDTASLAVFPVVNELEVELASGTYLKHSQVRIMGVSADIQNQGRTVVDIDLVPLSEKFDNKTVVLISRRFSHKKIHLNRSLFGDYTLLYITYQVSGMSPLLPHGTSTGSGPLPSGNTSGLPFTANFTSGRKNEEMSLRTIIIVAVSSVIVSLGMVGIFYIIFKWRKTRRPSSDLDLQFTLSPNMRSVMGPMLCSRMTSSTSVSHMSTMDTSALSVKTFSLSEIEKATDRFSSQRVLGEGGFGRVYHGRLNDGTDVAVKLLTRDIQQSGDREFTVEVEMLCRLHHRNLVKLIGICTEGHIRCLVYELVRNGSVESHLHGVDQRNNPLDWEARKKIALGAARGLAYLHEDSNPHVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHPVPTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPVGEENLVVWARPLLKSREGLERLVDPTLAGTYDFDEMAKVAAIASSCVNLEVTHRPFMGEVVQALKLIFNDNDDADYYSQKESSGQESDFRGNLSDSSAWYDEPEDITCRLDFRPTLASTIITMDYSSGPLDVLENRQFAGSTYMGDDMSLPIRLGNSSGPLRTARRSNLSFYRLTGSQSDHGVFPSKRV 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02766 750 Pfam Protein tyrosine and serine/threonine kinase 354 625 IPR001245 GO:0004672|GO:0006468
Trre2g02766 750 MobiDBLite consensus disorder prediction 638 657 - -
Trre2g02766 750 FunFam receptor-like serine/threonine-protein kinase ALE2 325 428 - -
Trre2g02766 750 ProSiteProfiles Protein kinase domain profile. 352 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02766 750 Gene3D Transferase(Phosphotransferase) domain 1 429 650 - -
Trre2g02766 750 MobiDBLite consensus disorder prediction 641 655 - -
Trre2g02766 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Trre2g02766 750 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Trre2g02766 750 SUPERFAMILY Protein kinase-like (PK-like) 336 623 IPR011009 -
Trre2g02766 750 Gene3D Phosphorylase Kinase; domain 1 322 428 - -
Trre2g02766 750 FunFam Receptor-like serine/threonine-protein kinase ALE2 429 644 - -
Trre2g02766 750 PANTHER OS01G0750732 PROTEIN 87 646 - -
Trre2g02766 750 MobiDBLite consensus disorder prediction 50 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02766 Trre-Chr2 23908155 23913514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02766 98 744 Receptor kinase-like Gene Family AT5G56890 49.396 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre2g02766 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02766 - - gmx:100792309 927.932