Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02763 ATGGGGAGAAGAGGCAATATGCAGTGTATCCGTTGCAATGGGTGTCGTGTACTTCGCAAAGGTTGCAGTGATGACTGCATCATCAGACCTTGCCTTGAGTGGATCAAGTCCCCTGAATCTCAAGGCAACGCCACCCTATTCCTTGCCAAATTGTATGGCCGAACTGGCCTGCTCAACCTCCTTGCTAACGCTACTGATCAAAATGCCCAAATTGTGTTCAAATCATTGTTATATGAGGCTTCGGGTCGATTGGTGAATCCCACACATGGAGCGCTGGGTTTGTTTTGGATAGGACAATGGAACCGATGTGAAGCTGCAGTTGAAGCTGTGTTGGCTGGATCAAATATTAATGATGTTACAATTGTTGATGGACAAACATCATCAAGTACAATCATTGCTGAAAATCGTGTTCTTCCAACAACCAATATACGCCACGTAGCAAGAGGTACCAATGTGGGCATCAAAGAGAGAACTCAATTCAAGAGAGTTGGGTCTACTATCAAGCCCAAGCCGCAAGTTGGTTTGGTCGACAAGGCTACACTTTTAAAATCAGTTTTGGAGAATGGCAGTACAGAAACAGCGGAAGCTTCGTCGGTGATTGAAACAGAGTTGAATGAAGCTGTTGAAACTCAAGTGAACTTGGAACTCACTCTTGGTTTCAATTTCCAATCAAACAATGGCAAAAAAGAATAG 693 0.4401 MGRRGNMQCIRCNGCRVLRKGCSDDCIIRPCLEWIKSPESQGNATLFLAKLYGRTGLLNLLANATDQNAQIVFKSLLYEASGRLVNPTHGALGLFWIGQWNRCEAAVEAVLAGSNINDVTIVDGQTSSSTIIAENRVLPTTNIRHVARGTNVGIKERTQFKRVGSTIKPKPQVGLVDKATLLKSVLENGSTETAEASSVIETELNEAVETQVNLELTLGFNFQSNNGKKE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02763 230 ProSiteProfiles LOB domain profile. 10 116 IPR004883 -
Trre2g02763 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 12 218 - -
Trre2g02763 230 Pfam Lateral organ boundaries (LOB) domain 11 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02763 Trre-Chr2 23890941 23892318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02763 10 153 AS2 family AT1G68510 56.250 2.86e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre2g02763 LOB 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02763 - - mtr:25485496 310.071