Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02752 ATGTCTAAAGAAATGAAGTCCAAGCACAATCCATCAAATGTAGTAGCCAAATTAATGGGGCTTGAAACCCTTTCAAAGGGAGAGCCTAATTTATCTATGATTAGAAGCCAAACTAAAGATTATTCTCAAGACATGTATGCTCATTTAGGATGGCCATTGAAACATTGGAAGGTGGAAGATAAGTTTATGACGGATAATAAGGAAATGCTTCTTGAAGTTCATCGTCCAAGCACAGAACAGATTGGTAACAAAGATGGATATGAAACATGGCTGCAATCTCAGAGAGGAAGGTGGAGAGAAGATTTTGATGAGGGGAAGATGGCTCTTGTCCGTCAGAAATTCATCGAAGCAAAGTATCTGTCGACTGATGAGACGTTGCGTCAATCCAAGCAATTTGAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTAGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCGTCTACTCCACCGGACGATTCAAACTGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTCCGGAAAGGGTAGGAAGAATGATAGATTGATTAAGAAACAAGCAGATTGTGATCAAACAACTGTATGGGAGAACATGAATCGTGGTTACTCTCCGGAATCTACTCGAATAGTAGTATTGAAACCTAGTCCTGGAAGGACAAATGAACTTAAGGCTTTAGTTTCTCCAACAAATCCATCACCTCAAAGTTTCTATCAGGGAAATGCAAATGATAATGTACTTGAATCCATAAAAGTGGCTAAAGAGATTAGAATGCAAATGCAAATGCATGAAAGCCTAAGTAGCTATCAAAAGGATAAAAGTTTATTACATTCTTCAGCGTTTTCCAATGGCTATTCTAGTGATGATAGCTCATATAACAAATCATATCATGATTTGGAAGCTATGTCACCAATGCCAAGGCATTCATGGGATTGTATCAATGTATGTGGAAGTCCTTATTCTACGCAATCTATGGGTCGTGCAACATGTTCTCCCGAGTCATCGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAATACTGTTACAGCTAAAGAAAAAGATCATCAAGAACAAAGGCGTGTAGCGAGAAACTCTACCTTAGGAGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGTTACATCTGTGGTTGAGAGTGCTGATAAACACCATGAAGAACCAAGTAAATCCATTTCTTGCAGTCAATCTGTCATTGAAGAAATGAGCACTGATGATTTGTCTCAAAATGTTTCTTTGGCAAATTCTGTTCCTGCATCGTCTACTGTCTATGAACCCGGCCTCGGCGTTGATGCTAGCATAGAACATGACTCCAAGGTGGTAGCAAAGTCAAAGAGTAAGAAATCATCATTTAAAGGAAAAGTGGCAAGTTTCTTCTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGTTCATCTCAATCTATAGATGAATCTGAAACCACTGTCACCGAAACATCGGTTACATCAATAAATTCACCTGGACATAATGTGTCTCAAAGCTCAAATGTTGGTGGATTTGAAGAGTCTCTTGCAGCTCTGTGTGAGTTATCATGCAAAACTTCAACAGATTCATATTCTTGTGGACAACAAGAAGACATGATTACACTAGAGCATGGATTGATTGAGTCAAAGCCTGTGGTGCTAGAGATTCCAAATGAAAAACAGGATCGGCCAAGTCCAATCTCAGTATTAGAATCTCCATTTGAAGATTATAATACAGCTCATGAGTCCTTGGAATGCATGAAGGGTGATCACATGGGATCATTGGTGTCACTGAAGTCCAATTTAATTGACAAATCACCACCAATAGAATCAGTAGCTAGGACACTATCATGGGATGAAGATTCTTGTGCAGTGTTAACAAGGGCATCTTCCTTAGACACCAAGTTAGAGGAACATGATTGGCTTCTCTTAGTCCAAAAACTACTATCAGCATCTGGACTAGATGATGATGATCAAGAACAACAGCATGACTCATTTCACACAAGATTCCATTCCCTTGAAAGCCCATTAGACCCATCATTGAGGGACACATATGCCAACATAAATGACAATACTCAGCCTCTTAATGAGGCCAAGAGAAGGAAAATGAGATCAAATCAGAAACTTGTATTTGATTGTGTTAATGCTTCACTATTGGAAGTTGTTGGTTATGGGTCAGAAAATTACTTCAAGATGTACTGTGGGGCCCACAGGAGGGGCTTAGTTCAAGAAGGTTCATGTTTGATGGACCACATTATGACCCAAATGAAGGAATTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCAGATTGGGTTGGTTGAGGTTATGAGAATGGAGATTGATTCTTTGGGGAGGGAAATAGAAGGAAAGATAATAGAAGAACTAGTAGAAAATGTTGTGCTTGATTTTACAGGAAGATGA 2520 0.3885 MSKEMKSKHNPSNVVAKLMGLETLSKGEPNLSMIRSQTKDYSQDMYAHLGWPLKHWKVEDKFMTDNKEMLLEVHRPSTEQIGNKDGYETWLQSQRGRWREDFDEGKMALVRQKFIEAKYLSTDETLRQSKQFEDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDSNCITLIKPLKMFGNDKSSGKGRKNDRLIKKQADCDQTTVWENMNRGYSPESTRIVVLKPSPGRTNELKALVSPTNPSPQSFYQGNANDNVLESIKVAKEIRMQMQMHESLSSYQKDKSLLHSSAFSNGYSSDDSSYNKSYHDLEAMSPMPRHSWDCINVCGSPYSTQSMGRATCSPESSVCIEAKKRLSERWNTVTAKEKDHQEQRRVARNSTLGEMLSLSLVKKSVTSVVESADKHHEEPSKSISCSQSVIEEMSTDDLSQNVSLANSVPASSTVYEPGLGVDASIEHDSKVVAKSKSKKSSFKGKVASFFFSMSKKSTKKKSSSSQSIDESETTVTETSVTSINSPGHNVSQSSNVGGFEESLAALCELSCKTSTDSYSCGQQEDMITLEHGLIESKPVVLEIPNEKQDRPSPISVLESPFEDYNTAHESLECMKGDHMGSLVSLKSNLIDKSPPIESVARTLSWDEDSCAVLTRASSLDTKLEEHDWLLLVQKLLSASGLDDDDQEQQHDSFHTRFHSLESPLDPSLRDTYANINDNTQPLNEAKRRKMRSNQKLVFDCVNASLLEVVGYGSENYFKMYCGAHRRGLVQEGSCLMDHIMTQMKELIANGMRFVWGGDSHSLVVENVVRKEVVQIGLVEVMRMEIDSLGREIEGKIIEELVENVVLDFTGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02752 839 Pfam Domain of unknown function (DUF4378) 660 830 IPR025486 -
Trre2g02752 839 Pfam Protein of unknown function (DUF3741) 111 152 IPR022212 -
Trre2g02752 839 MobiDBLite consensus disorder prediction 495 523 - -
Trre2g02752 839 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 838 - -
Trre2g02752 839 MobiDBLite consensus disorder prediction 489 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02752 Trre-Chr2 23745764 23749441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02752 1 837 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 36.755 1.93e-123 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02752 - - psat:127093203 1132.47