Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02747 ATGATAGTTCTCAGGATCTTGACATGGGAGGATGCTTACTATGACAATCCTGAAAATTGTTATTCTTCCCAAAGTGGTGGTGATTTTTCACACGACCCTCTAGGATTATATGTGGCAAAGATGTCGTATCAGGCATATTCGTTAGGGGAAGGGATTGTTGGACAAGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATCAAATTACAAGTTCTGGCCCATCTTTTAAGACAATTGCTGTTGTAGCCGTAGTTCCACTCGGAGTTGTTCAACTTGGCTCTTCAAATAAAGTTCTTTGTGGTGCTCCTTGTTCATGTGTTTCGTTTGTTTTCATTGGTTCTTTACTCTTCTTCAAGTTCAGGTAA 372 0.4032 MIVLRILTWEDAYYDNPENCYSSQSGGDFSHDPLGLYVAKMSYQAYSLGEGIVGQVAVTGKHQWICADNQITSSGPSFKTIAVVAVVPLGVVQLGSSNKVLCGAPCSCVSFVFIGSLLFFKFR 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02747 123 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 101 IPR043561 GO:0003700|GO:0006355
Trre2g02747 123 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 37 100 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02747 Trre-Chr2 23699978 23703701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02747 6 100 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 52.252 3.22e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02747 - - gmx:100777740 140.198