Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02737 ATGGCACCAAAGAAAGGCATTATCGGCGAAGAAAGAAGAGTCTTCACCGAAGAAGACGATCTTACCATTTTAAAAGCTATTATGAAGTTCATGTCCGAAACCGGAGATATTCCCTATTCTACTGATTTTCACACTTTTGTGAAAAATAAGATTCGTGGTAAGATCACTGTGAAACAACTGAACAGAAAGATTCACAGTTTCAAGGGAAAATATGGAAAAGAAAGTGAAACATTCACCAAAACTCATGAAAAGAAAGCTTTGAAGCTTTTCCTGAAGATCGATTGGGAAACCAACAACGGAAGTAAATCTGGAATCAAATCTACGGAAAAGGGATTGGAACATCAAATTGCTCAAGTGAAGATGTACATTGATCAGGTAAAGTTCATCAAGGATCAGGCCGTCTTGATGGCGTAA 414 0.3768 MAPKKGIIGEERRVFTEEDDLTILKAIMKFMSETGDIPYSTDFHTFVKNKIRGKITVKQLNRKIHSFKGKYGKESETFTKTHEKKALKLFLKIDWETNNGSKSGIKSTEKGLEHQIAQVKMYIDQVKFIKDQAVLMA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02737 137 PANTHER BNAANNG10740D PROTEIN-RELATED 5 103 IPR007592 GO:0006355
Trre2g02737 137 Pfam Protein of unknown function, DUF573 12 93 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02737 Trre-Chr2 23623007 23623420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02737 12 89 GeBP Transcription Factor Family AT1G61730 33.333 2.29e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre2g02737 DUF573 4.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02737 - K00548 cam:101512869 65.0846