Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02730 ATGGCTGACTCCACTCAAACTCCAACTAATGGCATCCATTCACGAACGATTATATTAAACGATTGGTGGCTCGTTAAATCCCAATATCACTTCCAAGGAAACTGTTTAGCTGTCTCCGGCATCTCTTCCAGAAAGGAAGAAGCGGTTCAAATTTTTGTTTCTGCTCCTATTATCAAAAGATATGATGTGTTTTCCCTCGAGAGTGCGGATGGTATATATGTTATCACTAGGGGTTTCATCAACGAGAAGCGCACACTGGAAAATGGTTTTACTCCTCAGATTTTAAAGAGTTTTTTATATGGTTTTCCTCCAAACTGGGAAAGCTATGCTCTAGAATGCATCAAAGAAGAATCTGAAGTTGGTATTGATTCGGCTAATGCTGTTCCAGCGAATGTGTCTACAATTTGTCAAGAAATCTTGTCTGATAGTGAGGAAAATTCCATTCCTACTCTGTTGGTGTTTCCTGAAGAAGCCCCGGGAAAATGCAAGAAACCATCTGCTGCAGACAAATGCAAAGTCTCAGAGGAGATGAGTGGGGTTGATGTTGCTTATGGTAGTGACGGAAATAGACGCTGTACCAGGTTGTATAATATTAAAGTTTGTCAGCAGAAGCAGCAGCAGCAGCCTGTGTCTGGAGGTCCTCTCAAGCATCTAGATATAGAGCAGAGTTCTACCTCAATGGAAGTGGAAAATCGTGATTTGGATACTGCTGTTTCTAATAATGTATCAGCAAATCTTCTAGAAATATCACCTGATGCTGTGGAAAAGTCTTTTCCTACTTCTTTTGTATCACCGGAGAAGGCCACGGGAGATTGCAAGAAGTCATTACTTGAAGATGAACATGATAAGTCAATTAAAATGAGTGAGGTCAATGTTGTTCGTGGTAGTGGTGGGAATAGACGTAGTGTCCGGTTGCATAATATTAAACTCAGCCAGAAGAAGCAACCTGCTACTGAAGGTTCTCCAAAGTATCCAAATGAACACCAGGTCTCTCTCTCGGCAGCCTTGGAGAAGAGTGATGGAGGACAGGAAAGTCCATCAACACCTGTTCAATCACAATTGAAGAGGCCAGTCAATGCATTGTCTGAGCAGGTCACGAATAAATTCGCATCCAGAGTTTTTAAAGCTACGCCAGGAAAAACTGAAGGATGTTATAAGAAAAAAAGGGTTACAATTATTAAATCTGCATCTTCTGTGAAATCTTCACACGAAAGGAATGTAAATCACTTGAACAAGGGTAGTAAGCAGAGATTATCCGTCGTTTCTCCAGAGTCATTGAGTCTCAAAAAATCTAGATCTGGAAGGTTACTTCTACCTCCCTTAGAGTTTTGGCGAAATCAAATACCTATTTATAATGTGGACCATGAGATTACAGAAATTCAGGAAGGCTCGTCTTTGATATCACCTTTTAGAGTCTCTTCGCCATCATTGGGAAGGTCTGCAGAAAATATGAGAGGTGGAAAAATGATTGAACTGAGAAAAATGCAGAAATTATAA 1497 0.4048 MADSTQTPTNGIHSRTIILNDWWLVKSQYHFQGNCLAVSGISSRKEEAVQIFVSAPIIKRYDVFSLESADGIYVITRGFINEKRTLENGFTPQILKSFLYGFPPNWESYALECIKEESEVGIDSANAVPANVSTICQEILSDSEENSIPTLLVFPEEAPGKCKKPSAADKCKVSEEMSGVDVAYGSDGNRRCTRLYNIKVCQQKQQQQPVSGGPLKHLDIEQSSTSMEVENRDLDTAVSNNVSANLLEISPDAVEKSFPTSFVSPEKATGDCKKSLLEDEHDKSIKMSEVNVVRGSGGNRRSVRLHNIKLSQKKQPATEGSPKYPNEHQVSLSAALEKSDGGQESPSTPVQSQLKRPVNALSEQVTNKFASRVFKATPGKTEGCYKKKRVTIIKSASSVKSSHERNVNHLNKGSKQRLSVVSPESLSLKKSRSGRLLLPPLEFWRNQIPIYNVDHEITEIQEGSSLISPFRVSSPSLGRSAENMRGGKMIELRKMQKL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02730 498 MobiDBLite consensus disorder prediction 307 356 - -
Trre2g02730 498 MobiDBLite consensus disorder prediction 309 356 - -
Trre2g02730 498 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 14 463 - -
Trre2g02730 498 MobiDBLite consensus disorder prediction 396 418 - -
Trre2g02730 498 Pfam SANTA (SANT Associated) 17 109 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02730 Trre-Chr2 23538122 23541110 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre2g02730 SANTA 3.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02730 - - tpra:123905154 516.924