Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02706 ATGGAGAACCAACAAACACAAACATGGTTAGAAAAGGCAACACCGTTCATAGCTATCTTGTCTTTGCAATTAGGATATGCAGTTATGGATGTTTTATCAAAGGCTGCATTAAATAATGGAATGAGCAACTATGTTTTCGTTGTATATCGCCATGCCGTTGCATTCATTGTCATAACTCCTTTTGCACTCTATTTTGAAAAGAAAGTAAGGCCGAAAATGACGATTTCAATCTTCATCAAGATAGCGGCGCTCAGTTTGCTAGAGCCGGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAATATACAACAGCAACTTTTGCAGCTGCCATGAGCAATATGCTTCCTGCTATTACCTTTATATTAGCTTCAATTCTTAGGCTTGAGAAAATAAAGATAAAAAGTATACGAAGCCAAGCAAAGATATTGGGAACAATAGCTACAGTTACAGGTGCCATGGTGATGACATTAGTTAAAGGGCCAATACTTGTTGAGACATTCGGAGGGAAGAGCCAAATCCATCATAGTGGGGGTACAAGTAATCAACATACAATACTTGGATCTGTATTGATCACAATAGGATGCTTTAGTTGGGCTTGTTTTTTTAACCTTCAAGCTATTACCCTTCAAGCCTACCCTGCGGCACTCTCTCTTTCCTCATGGATATGCCTAATGGGCACAATTGAAGGTGCAGCACTGGCTTCAATTATGGAATGGGATCGTCCCTCAGTTTGGTCCATAAAATGGGATATGACATTGTTGTCTACTCTTTATTCGGGCATATTCTGCTCAGGTCTAGCTTATTACTTGCAAGGAGTAGTGATGAAAGCTAGAGGTCCAGTTTTTGTGACAACATTTAGTCCTTTATGTATGGTGATTGTTGCTATCATGGGATACTTCCTTCTTGCAGAGCAAATGTTTCTCGGAAGAGTGATAGGTGCATTTATCATTTGCTTGGGCTTGTACCTTGTTGTGTGGGGAAAAAGCAAAGATTACAATTGCACATCAAATCCAATTATTGACGAGCCTGTTTTACCGACTAAGCAAATTACGGGTGAAAATTGTACTTAA 1071 0.3922 MENQQTQTWLEKATPFIAILSLQLGYAVMDVLSKAALNNGMSNYVFVVYRHAVAFIVITPFALYFEKKVRPKMTISIFIKIAALSLLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFILASILRLEKIKIKSIRSQAKILGTIATVTGAMVMTLVKGPILVETFGGKSQIHHSGGTSNQHTILGSVLITIGCFSWACFFNLQAITLQAYPAALSLSSWICLMGTIEGAALASIMEWDRPSVWSIKWDMTLLSTLYSGIFCSGLAYYLQGVVMKARGPVFVTTFSPLCMVIVAIMGYFLLAEQMFLGRVIGAFIICLGLYLVVWGKSKDYNCTSNPIIDEPVLPTKQITGENCT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02706 356 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020
Trre2g02706 356 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020
Trre2g02706 356 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Trre2g02706 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
Trre2g02706 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02706 Trre-Chr2 23272737 23278932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02706 1 354 Nodulin-like Gene Family AT2G37460 62.535 3.99e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02706 - - gmx:100811147 509.22