Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02703 ATGTCGTTCAACAATCAACCATTTTGGATGGGAAAGAGTTCTGGGAATTTGAATGATGGTGATGATATGACATATGATAATTCTTCTAGAATCGAGTCAAAGCGTACTAATCAGTGGTTCATGGATAGCCCTGAAGTGGATCTGGTTCCCAATAAGAAACAAGCAGTAGAGGCTCCAAACAGTTTATCGTCAGGAATGCTCAACTCCAATATTTCGTCGTGGGGAAATTCTTTAACTGGCCATTTTACTGCACAACTATTTGATCCAGCTGCTGCATCTATGAATTTTGAAGACACAAACATTTTCCCTTTAAACATAGATAATAAGTTGAGTGCGGAGGAAAAAGATATCTTGGATCCTTTTGGGGGTGATGCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATTCTCAACTAGTTTTTAACCATGACGGTATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAGTCTGAGAATTTCATGTCTGCTCCAACTAATAATCCCTATGATGGGGGAGTTAGCAACACCGTGTCAAACACTCATGCATTCAAGGAAGGCGATCATTCAATATCAACAAGTCTCACATACAACAAAGGGGATGACAATGTAATATTGGTGGATGGCGTTTTTGACAGGACAAATAACAATTTAATGTCAATGAGTCAATCTTATAATGAGGGAGATGGCAACTTATCAATACCTTCAACATACAAAGATATTGGTAACCACTTATTCAATAAGGTTGAAGATGGCACCATATCAATGGGTCACACTTACCATCAGAGGGGAAATGACATGCCATTTGTTGCTCATTCTTATAATAAAGGTGGAAGCACTATAATATCCTTTGGTGGCTGTGACGATGGCGATAACGATGTAACTCCAGCTGACTTATTTGTTTCCGACTACGGACTGTTTATGGGTCAAGCACCTTTGTGTATGTCGCATATGTCACAAGTTGCGAATGAAAAAGAGTTGGTTAGATCAAGCACTAAACTACTTTCAATTACAGCTCAAACATCTGCATCTGAAACTGAAAATGTTACCAAGACAAAAGAGGAGATGAAAATGTGTAAAAAGGCTACTTCAAATAACTTCCCTTCAAACGTTAGAAGTTTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTCAAGTATAAGGCATGGTCACGGGAGAAGGAACTTCGAGCTGTTATAAAAGGTGCTGGGTATTTGTGCAGCTGTCCGTCGTGTAGTTTTTCTAAGGTTATTAATGCATTCGAGTTTGAACGGCATGCTGGTTGCAAGACAAAGCACCCAAATAATCATATTTACTTTGAGAATGGGAAAACCATATATGGAGTGGTACAAGAGCTGAGGAGCACTCCACCGAATATGTTATTTGAAGTTATTCAAACAATAACCGGTTCACCTATCAATCAGAAATCCTTCCGCATCTGGAAAGAATCCTTTTTGGCTGCAGCACGCGAGCTCCAGCGCATATGTGGAAAAGATGAAGTAAAACAGTTGTTATAA 1518 0.3933 MSFNNQPFWMGKSSGNLNDGDDMTYDNSSRIESKRTNQWFMDSPEVDLVPNKKQAVEAPNSLSSGMLNSNISSWGNSLTGHFTAQLFDPAAASMNFEDTNIFPLNIDNKLSAEEKDILDPFGGDASFGLSMSTTLEDSQLVFNHDGIRKVKVNEVKESENFMSAPTNNPYDGGVSNTVSNTHAFKEGDHSISTSLTYNKGDDNVILVDGVFDRTNNNLMSMSQSYNEGDGNLSIPSTYKDIGNHLFNKVEDGTISMGHTYHQRGNDMPFVAHSYNKGGSTIISFGGCDDGDNDVTPADLFVSDYGLFMGQAPLCMSHMSQVANEKELVRSSTKLLSITAQTSASETENVTKTKEEMKMCKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRAVIKGAGYLCSCPSCSFSKVINAFEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPPNMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKDEVKQLL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02703 505 PANTHER AUTOIMMUNE REGULATOR 8 449 - -
Trre2g02703 505 Pfam Tify domain binding domain 399 453 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02703 Trre-Chr2 23233040 23235662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02703 348 485 PHD Transcription Factor Family AT3G53680 55.072 4.12e-45 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02703 - - mtr:25484103 830.476