Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02676 ATGAGAAAATTTTGCTTGAATCCCAAAACGCCGTCGTTTTCAATACACCGTAACACTTCACCATCTTCAACTTCAAGTTCATCCTCCACTACAATACCGTCGTCAATTAGAAAAGCTACAACACGCATAGAAGCAGCAGAAGCGCTTATTCTTAAATGGAACTCCGAAACTTCCGATTATGCTAAAGTAACTTCTCTATTCTACAACGACAAAAACGAAGCAATTCAATATATTCACTGCGTAAATAATCTTCATAAAGCAATGCATTCATTACTCAAACTCGATCCATCTTCTCCAAAACTCATCAAAGCACAGAACCTAATGCAAATCGCCATGAAGAGACTCGAAAATGAATTCTACCAGATATTATCCATGAATCGAGCCTACTTAGACTCTGAATCTGTCTCCGTTAGATCTTCTAGAACTTCATGGTGTTCTTATGACGATGGAATACCGGAAGAAGACGATGTTCGCGCTGCAGAGAATTGTATCTCTGAAGTCGAACGTGTTTCTTCCGATGCTATTGATGATTTGAGAATTATTGCTGATTCTATGATTTCTAACGGTTATGGAAAAGAATGCTTCAAAATTTATACTACAGTGAGAAAATCGATAGTTGATGAAGGAATTTATAAACTCAACGTGGAGGAAAGAAGCTTCTCGAAGGTGAATAAGATGGATTGGAAAGTTCTAGAGATGGAAATCAATAGTTGGTTAGAGGCGGTTAAGATCTCTGTAAGAACGCTCTTCGCCGGAGAGAGAATCCTCTGTGATCGGATTTTCGCTTCCAGATCCGTCAGAGAAGCTTGTTTTGCTGAGATTTCTAGAGATGGAGCTACTATGCTTTTCCAATTTCCTGAATTTGTTGCCAAAACAAAGAAATCGACTCCGGAGAAGATTTTCCGTTTGCTCGATATGTACACCGCAATCACCGTGTTGTTACCGGAGATTGAATTGATCTTCTCGTTCAATTCAACCTCCGGTATTAAATATCAAGCATATGATTCGCAAAATCGATTAATGGATTCTGTAAGAAATATTATCTCCGAATTCGAGAATGCAATCCTCAAGGATTCTTCCAAATCGGAGGCGAATTTCGGCGGTGTTCATTCCCTAACAAAGAGAACAATGGAATACCTAACTAGTCTTGCAGATTATAGCAATGTGCTTTCTGAAATATTCTTGGATGTTCCTCCGTCGTCAAAGTTTATGTTGTCGGAATCTTACTTATACAGTCCAGAATTATCCAACAACACGATGGAAAACGGGACGGGGTTTTCTGTTCAAATGATGTGGTTGATTCTGGTTCTTCTATGCAAAATCGACGTTAAATCGAAGCAATGCAAGAACGTATTGTTGTCTTACCTGTTTCTCGCGAACAATCTTCGGCATGTTCTGGAGAAGGTACGAGGGTCGAACTTGCAATACATTCTTGGCGATGATTGGTTGTTGAACCAGATAGCAAAGGTGAAACAATTGATGAAAAACTATGAGAGAGTAGCGTGGGGCGAAGTATTTTCTTCATTGCCAGAAAATCCAACGGCGGCGTTATCAGCGGCAGAGGCGAGGGAGGTGTTTATGAAATTCAATTTGGAATTAGAGAAGGCTTATAGAACACAAAGTACATTTGTTGTGCCGGAATCAAAATTTTGTGAAGATATAAAAGCATCTCTAGCGAGAAAAATAGTTCCAATATATCGTGAGTTTTATGATAGGCACTATATTATGGCGGGAAACATTACAGAAATGAAGGAATATGTCAATTTTATCCCTGAAAACGTTCAGAATTACCTGGTGAATCTCTTCGGTGGGATTGGAGTTAGAGACGAGTGA 1833 0.3928 MRKFCLNPKTPSFSIHRNTSPSSTSSSSSTTIPSSIRKATTRIEAAEALILKWNSETSDYAKVTSLFYNDKNEAIQYIHCVNNLHKAMHSLLKLDPSSPKLIKAQNLMQIAMKRLENEFYQILSMNRAYLDSESVSVRSSRTSWCSYDDGIPEEDDVRAAENCISEVERVSSDAIDDLRIIADSMISNGYGKECFKIYTTVRKSIVDEGIYKLNVEERSFSKVNKMDWKVLEMEINSWLEAVKISVRTLFAGERILCDRIFASRSVREACFAEISRDGATMLFQFPEFVAKTKKSTPEKIFRLLDMYTAITVLLPEIELIFSFNSTSGIKYQAYDSQNRLMDSVRNIISEFENAILKDSSKSEANFGGVHSLTKRTMEYLTSLADYSNVLSEIFLDVPPSSKFMLSESYLYSPELSNNTMENGTGFSVQMMWLILVLLCKIDVKSKQCKNVLLSYLFLANNLRHVLEKVRGSNLQYILGDDWLLNQIAKVKQLMKNYERVAWGEVFSSLPENPTAALSAAEAREVFMKFNLELEKAYRTQSTFVVPESKFCEDIKASLARKIVPIYREFYDRHYIMAGNITEMKEYVNFIPENVQNYLVNLFGGIGVRDE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02676 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 35 603 IPR004140 GO:0000145|GO:0006887
Trre2g02676 610 Gene3D Exocyst complex component Exo70 59 607 - -
Trre2g02676 610 MobiDBLite consensus disorder prediction 11 35 - -
Trre2g02676 610 SUPERFAMILY Cullin repeat-like 36 602 IPR016159 -
Trre2g02676 610 Pfam Exo70 exocyst complex subunit 237 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre2g02676 610 Coils Coil 36 56 - -
Trre2g02676 610 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02676 Trre-Chr2 22978539 22980371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02676 43 606 EXO70 exocyst subunit family AT3G09520 47.917 1.12e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02676 K07195 - gmx:100798477 727.628