Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02642 ATGTATGGAAATTTCAGGTTTTGTAAGTTTGGACGTGGAGGTGATAAAAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGAAATAAGTACTATTTCTGTTGCCAACGAGACACGGAAGCAATACACGACGCTTCGACACTTTCCTGCCGATTCCAGAAAATACTGCTACACACTTGATGTTGTGAGTAGGACACGGTATCTACTGAGGGCAACATTCTTGTATGGAAACTTTGATAACAACAATGTTTACCCGAAATTTGACATTTCTATCGGGGCTACTGATTGGTCTACTATTGTTATATCGGATGCAAACACTATAGAAGTAAGAGAAATTATATTTTTGGCTTCAAGTCCTACTGTTAGTGTATGTCTATCCAATGCAACAACTGGCCAGCCATTCATATCTACACTTGAACTTAGGCAATTCAACGGTTCGGTTTATTATACATTCTTTGAGGAAGACTTTTACCTCAGCGTCTCTGCGAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAGTTAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTACCTCGTTGATGTTGCTGATGGAACCAAGAAAATTTCCACCAATGTATCAATTGATATTAACAGAGATGAAATGCCACCAGTGAAAGTAATGCAGACTGCTGTAGTAGGTACAAATGGATCTCTAACATACCGGTTGAACTTGGATGGTTTTCCTGCTATGGGACGGGCATTCAGCTATCTTGCAGAGATAGAAGATTTTCCGCATAATGAATCTCGAAAATTCAGGCTAGTACTTCCAGGCCAGACTGAAATTAGTAAGGCCGTGGTAAATATCGAAGAGAATGCTCTAGGAAGATATCGTGTTTATGAACCGGGAATTAACAATGTGTCCCTACCCTTTGTGATGTCCTTTAAATTAGCAAAAACATCTGACTCTTCCAAGGGTCCTCTTCTCAATGCCATGGAGATTAATAAGTATCTAGAGAAAAATGATGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCTCACTACTCGTCAGCAGATTGGGCACAAGAAGGGGGTGATCCATGTTTACCTGTTCCATGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTGGGAAAAACATGACGGGCGATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGAAATATGCTGACAGGCCCAATACCAGATTTCACCGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGGCAGGTGCGCTCCCAGCCTCTTTGGGGAGCCTTCCGAATTTGAAGGAACTGTATGTCCAGAACAATATGTTATCTGGAACCGTACCGTCAGAACTTTTGAGCAAATATTTGCTGTTTAACTACTCCGGAAACAATGGTCTTAATAAAGGAAGCAGAAAAAACAATCAATTGTATGTCATTATTGGTTCAGCAGTTGGGGCCGCCATTTTACTTTTGGCTACTATTATATCATGTTTGTGTATGCATAAAGGAAAGACAAAATACTATGATCAAGACCACCTTGTTTCACTCTCTACTCAGAACCTGGAATCTAAGAGTGATGGCCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGCTCCACAAATAATTTTGAGAAGAAAATTGGATCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGAAAGATGGAAGAGAGATAGCAGTTAAAGTTTTAACTAGTAATTCATATCAAGGCAAAAAAGAGTTCTCAAATGAGGTGACTCTTCTGTCAAGGATACATCATAGAAACTTGGTACAGCTTCTAGGTTATTGCCGAGAAGAAGGGAATAGTATTCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACACGGACGGAGTATCAATTGGATTAAGCGACTTGAGATCGCCGAAGATTCTGCCAAAGGGATTGAATATCTTCACACAGGATGTGTCCCAGCAGTTATCCATAGAGACCTAAAAAGCAGCAACATTCTTCTTGACAGGCACATGAGAGCTAAGGTTTCAGATTTTGGGCTTTCGAAACTCGCTGTTGATGGAGCCTCTCACGTCTCTAGCATAGTTCGGGGTACAGTAGGATATCTGGATCCTGAGTACTATATTTCTCAGCAGCTAACTGACAAGAGCGATATTTATAGTTTTGGGGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAAATGCACATTGAGAGTGGTGATATACAAGGTATAATAGATCCAGCATTACACGGAGACTATGATCTACAATCGATGTGGAAAATAGCAGAGAAAGCGTTGATGTGCGTTCAACCACATGGACACATGCGGCCATCAATATCAGAAGTTGTGAAAGAAATTCAAGACGCAATTGCTATTGAAAGAGAGGCAGAAAGCATCTCGGAGGATGAGAATATGACGAGAAATTCAGTTCACTCTTCCATCAACATGGGTTCTATGGATCTCGCTGCAGCGGAGAATTACCTCGCTATTGATGATTCCATTGCACGCCCCACAGCACGATAG 2709 0.4061 MYGNFRFCKFGRGGDKNFTDEIGLKWTPDDKITYGEISTISVANETRKQYTTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATDWSTIVISDANTIEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTFFEEDFYLSVSARINFGAESDAPVRYPDDPFDRIWESDSVKKANYLVDVADGTKKISTNVSIDINRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAMGRAFSYLAEIEDFPHNESRKFRLVLPGQTEISKAVVNIEENALGRYRVYEPGINNVSLPFVMSFKLAKTSDSSKGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSGKNMTGDIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLAGALPASLGSLPNLKELYVQNNMLSGTVPSELLSKYLLFNYSGNNGLNKGSRKNNQLYVIIGSAVGAAILLLATIISCLCMHKGKTKYYDQDHLVSLSTQNLESKSDGHAEVAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGREIAVKVLTSNSYQGKKEFSNEVTLLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKMHIESGDIQGIIDPALHGDYDLQSMWKIAEKALMCVQPHGHMRPSISEVVKEIQDAIAIEREAESISEDENMTRNSVHSSINMGSMDLAAAENYLAIDDSIARPTAR 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02642 902 SUPERFAMILY L domain-like 378 494 - -
Trre2g02642 902 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 861 - -
Trre2g02642 902 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Trre2g02642 902 SUPERFAMILY Protein kinase-like (PK-like) 563 850 IPR011009 -
Trre2g02642 902 CDD STKc_IRAK 582 849 - -
Trre2g02642 902 FunFam Leucine-rich repeat receptor-like protein kinase 551 651 - -
Trre2g02642 902 FunFam Leucine-rich repeat protein kinase family protein 353 503 - -
Trre2g02642 902 SMART serkin_6 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02642 902 Gene3D Ribonuclease Inhibitor 353 508 IPR032675 -
Trre2g02642 902 PANTHER OS07G0107800 PROTEIN-RELATED 440 852 - -
Trre2g02642 902 Pfam Protein kinase domain 578 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02642 902 Gene3D Transferase(Phosphotransferase) domain 1 652 876 - -
Trre2g02642 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Trre2g02642 902 Pfam Malectin-like domain 15 340 IPR024788 -
Trre2g02642 902 ProSiteProfiles Protein kinase domain profile. 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02642 902 Gene3D Phosphorylase Kinase; domain 1 548 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02642 Trre-Chr2 22687270 22691937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02642 7 686 Receptor kinase-like Gene Family AT2G37050 66.279 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre2g02642 Malectin_like 3.5e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02642 - - gmx:100798007 1536.55