Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02627 ATGGGGAACAAGAAGCCTAATTGGTTTTCCAATGTGAAGAAAGCTCTTAGCCCTGACTCAAAGGAAAACAAAAATCAGAATTCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTACACACTTCAGACTCATACCAAGAAACTGATCAAGCACCGCCTTGTCCTCCACCTGAGGAGGACATTATTTTAACTCATGTTGAGAATGAAAACAATCATGATCATGATCATGTTCAAGTTGTAACAGATGTGGATGTTGAGGTACCAGTTCCCGATGTTCAGATACAAATTGCTGAGGTTCAAGCCACTCCAATTGTTCAGTTTACCCGTAAACCTCCAACGGATGAAGTTGCGGCAATCAAGATTCAAACTGCTTTTCGGAGATACATGGCAAGAAGAGCATTGAGGGCTTTAAGGGGGCTGGACAGGTTGAGATCGCTAATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTTCGCTCTATGCAGACTTTAGGTCATGTGCAATCCCAGATTCGTTCCAGGCGGCTCAGGATGCTAGAGGAGACTCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAGCTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCCTACAATCAAGAGAACAAATTGAAGCCAAGTTACTAAGCAAGTACGAGGCTGCTATGAGAAGAGAAAGAACAATGGCTTATTCATTCACTCATCAGAAAAATGGGAGGAATTCATCGAAATCTATAAATCCAATGTTCACGGATCCAACCAATCCTGCTTGGGGATGGAGCTGGTTGGAACGTTGGATGGTGGCCAACCAAAGCCTGATGGAAAAAGAAAACAACAATTCATCTGCAAAAAGTTCAAGCCGCGGGATCACCAGTGCTGAAATCAGCAAATCATTTGCTTGTTTCCAGCTCAATTCCGAAATGCATTCTCCAACAGCCAGTCAAAATCCGGGTTCGCCTAACTTCCAGTCCATTTCAAAGCCTCCCAAGCCAACAGTCGGTAAGAAACTGAATAAGGCAAGCCCAAAGGAAAGCTTTATTATGGACGATGACACCAAAAGCATGACGAGTGTGCAGTCGGAGAGAGTCCGGAGGAGGCACTCCATTGCTGGATCAACAGTGAGGGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCAAAGTCTAGGTTGCAAAGTCCATTAGCTGCAGAGAATGGAACACCGGTGAAAGGGTCATCTGGAAATGCGAAGAAACGACTTAATTTCCCGGCTTCGCCTGCTAGATCAAGGCGCCATTCTGGTCCACCAAAGGTAGAAAGCAGCTTAAATGCAGAAATCACCGTTTGA 1386 0.4466 MGNKKPNWFSNVKKALSPDSKENKNQNSSGSKKKWFGKKKLHTSDSYQETDQAPPCPPPEEDIILTHVENENNHDHDHVQVVTDVDVEVPVPDVQIQIAEVQATPIVQFTRKPPTDEVAAIKIQTAFRRYMARRALRALRGLDRLRSLMEGPVVKRQAISTLRSMQTLGHVQSQIRSRRLRMLEETQALQKQLLQKHTKELEIQIGEEWDESLQSREQIEAKLLSKYEAAMRRERTMAYSFTHQKNGRNSSKSINPMFTDPTNPAWGWSWLERWMVANQSLMEKENNNSSAKSSSRGITSAEISKSFACFQLNSEMHSPTASQNPGSPNFQSISKPPKPTVGKKLNKASPKESFIMDDDTKSMTSVQSERVRRRHSIAGSTVRDDESLASSPSVPSYMVPTKSAKAKSRLQSPLAAENGTPVKGSSGNAKKRLNFPASPARSRRHSGPPKVESSLNAEITV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02627 461 MobiDBLite consensus disorder prediction 316 461 - -
Trre2g02627 461 MobiDBLite consensus disorder prediction 13 32 - -
Trre2g02627 461 PANTHER IQ-DOMAIN 5-RELATED 1 450 - -
Trre2g02627 461 Gene3D iswi atpase 112 140 - -
Trre2g02627 461 MobiDBLite consensus disorder prediction 383 398 - -
Trre2g02627 461 MobiDBLite consensus disorder prediction 1 61 - -
Trre2g02627 461 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Trre2g02627 461 MobiDBLite consensus disorder prediction 316 336 - -
Trre2g02627 461 MobiDBLite consensus disorder prediction 405 427 - -
Trre2g02627 461 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Trre2g02627 461 MobiDBLite consensus disorder prediction 350 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02627 Trre-Chr2 22597341 22600356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02627 1 453 IQD Protein Family AT5G03040 50.955 2.57e-125 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02627 - - tpra:123912717 644.425