Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02614 ATGAGCGTAATCGACCTTCTAACTCGAGTTGATTCCATTTGCAAAAAGTACGACAAATACGACATCGAAAAGCACAAGGATGCCAATGTCTCCGGCGACGATGCTTTCGTCAGACTCTACTCTTCTGTCAACTCCGACATCGAATCCCTAATTCAGAAAGCAGAAACAGCTTCCAAGGATAGAGGGAAGGCATCTGCTGTAGCGATCAATGCCGAGATTCGTCGCACTAAGGCTCGGTTGTTGGAGGAAGTTCCCAAGTTGCAGAGGTTGGCTGTCAAAAAGGTAAAAGGGCTTTCGTCGCAAGAATTTGCTGCACGTAATGATCTTGTTCTTGCATTACCAGAAAGAATCCAAGCTATCCCAGATGGGACTCCTGCTGCACCAAAACAAACCGGTGGTTGGGCATCTTCTGGCTCACGCGCTGAAATTAAATTTGATTCGGATGGCCGATTTGATGACGAGTACTTTCAATCAACTGATCAATCAAACCAATTCAGGCAGGAATATGAAATGCGTAGAATAAAACAGGCAAGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAGACATGGCACATGATATGAACGAGGAACTGGATAGACAAGTTCCCTTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCGTCTGATCTTAAGAATACTAATGTTAGACTTAAAGACACAGTGAATCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTCTGGGAATTGCTGCCTACTTATACAAATGGCCGCAATTTGCGGCCGCGACAACCACTACTGCTATGCTATTCTACTATAGCGGCGATATTGAGAACATAGGTTGGCGGGATGAGCCCTATTTTGAATTTGAAGTTATTTATACATTTTATAAAAATTATACAAGAAGTGGACAAGATTTCATGGTTTGTCTGAAACCGTACTACCTACCAGTTTACAGCTTTGAGTCAATGGGCGGGTAA 993 0.425 MSVIDLLTRVDSICKKYDKYDIEKHKDANVSGDDAFVRLYSSVNSDIESLIQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWASSGSRAEIKFDSDGRFDDEYFQSTDQSNQFRQEYEMRRIKQASLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYKWPQFAAATTTTAMLFYYSGDIENIGWRDEPYFEFEVIYTFYKNYTRSGQDFMVCLKPYYLPVYSFESMGG 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02614 330 ProSitePatterns Syntaxin / epimorphin family signature. 175 214 IPR006012 GO:0005484|GO:0006886|GO:0016020
Trre2g02614 330 PANTHER SYNTAXIN 43 251 IPR045242 -
Trre2g02614 330 SMART tSNARE_6 164 231 IPR000727 -
Trre2g02614 330 FunFam Putative syntaxin-71-like 170 230 - -
Trre2g02614 330 CDD SNARE_Qc 179 229 - -
Trre2g02614 330 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 169 231 IPR000727 -
Trre2g02614 330 Pfam SNARE domain 206 255 IPR000727 -
Trre2g02614 330 Gene3D - 177 240 - -
Trre2g02614 330 SUPERFAMILY SNARE fusion complex 175 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02614 Trre-Chr2 22502252 22504985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02614 1 259 SNARE and Associated Proteins AT3G09740 74.046 2.21e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02614 K08506 - gmx:100819272 444.121