Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02602 ATGAAATTCTCATTTTTCGCTTGTTTCTCTTCTTGGGCTACCCAAAATAATAACAACAAAAACGATTATCCTGATGCAGAGAATGATGGAAGCTTTCGTGTATTTACTTATCACCAATTGAAATTAGCTACCGGTAATTTTGGTAACAAAATTGGAGAAGGTGGATTTGGCTCTGTTTATAAGGGGAGGCTCATGGATGGATCTTTGGTGGCAGTGAAAGTGCTTTCTATTGAGATTGAATCCATGAGAGGAGAGAGGGAATTTGTTGCAGAATTGGCTACACTAGCAAATATAAAGCACCAAAATCTTGTTAGCCTTAAAGGGTGTTGTGTTGAAGGAGCAAAAAGATATTTAGTCTATGATTACATGGAAAACAATAGTCTCCACCACACTTTCTTAGGTTCTGAGGATAGAAGGATGAGATTCAATTGGGAAACAAGGAGGAATATATCAATTGGTGTGGCTCGTGGAATTTCCTATCTCCATGAGGAGTTGAAGCCTCATATAGTACACAGAGACATCAAAGCAAAAAACATACTCATTGACAGAAATTTTACACCAAAAGTTTCAGATTTTGGTTTGGCTAAACTAATGAGAGATGAAACATCTTACATTAGCACTAAAGTTGCAGGGACATTGGGTTATTTGGCTCCAGAATATGCTAGTTCAGGACAACTAAGAAGAAAATCAGATGTTTATAGTTTTGGAGTAATGCTTTTACAAATTGTCACCGGCTTGGCTGTTGTAGATGCTTATACAGATATTGAACGTTTCATTGTTGAAAAGGCTTGGGTAGCTTATGAGGCCAATGATCTATTAAAAATAGTGGATCCTGTGCTTAATACAAACTATTCAGAAGAAGAAGCCAAAAAATTCCTCAAAGTTGGATTACTTTGTGTTCAAGAGACTGCAAAACTTAGACCACGAATGTCAGAAGTTGTAGAAATATTGACCAACAACAATATTGATATGAAAAATGTTCACATTTCAAAACCAGGATTTGTTGCTGATCTAAGAAACATCAGAATAAAACAACACATGACAACAGACTCGCCGCAAGGATCTAGTTCTTCAGGAACAAGCTTTTCAAGCTCTATCTGGAGTGTTAAAAATCTCGCTCGTTGA 1125 0.3671 MKFSFFACFSSWATQNNNNKNDYPDAENDGSFRVFTYHQLKLATGNFGNKIGEGGFGSVYKGRLMDGSLVAVKVLSIEIESMRGEREFVAELATLANIKHQNLVSLKGCCVEGAKRYLVYDYMENNSLHHTFLGSEDRRMRFNWETRRNISIGVARGISYLHEELKPHIVHRDIKAKNILIDRNFTPKVSDFGLAKLMRDETSYISTKVAGTLGYLAPEYASSGQLRRKSDVYSFGVMLLQIVTGLAVVDAYTDIERFIVEKAWVAYEANDLLKIVDPVLNTNYSEEEAKKFLKVGLLCVQETAKLRPRMSEVVEILTNNNIDMKNVHISKPGFVADLRNIRIKQHMTTDSPQGSSSSGTSFSSSIWSVKNLAR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02602 374 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Trre2g02602 374 CDD STKc_IRAK 51 319 - -
Trre2g02602 374 FunFam Cysteine-rich receptor-like protein kinase 2 123 325 - -
Trre2g02602 374 FunFam Serine/threonine-protein kinase receptor 16 122 - -
Trre2g02602 374 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Trre2g02602 374 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 358 - -
Trre2g02602 374 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02602 374 SUPERFAMILY Protein kinase-like (PK-like) 20 318 IPR011009 -
Trre2g02602 374 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Trre2g02602 374 ProSiteProfiles Protein kinase domain profile. 45 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02602 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Trre2g02602 374 Pfam Protein kinase domain 48 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02602 Trre-Chr2 22390083 22393267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02602 35 317 Receptor kinase-like Gene Family AT1G53430 51.568 1.69e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g02602 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02602 - - gmx:100813945 577.785