Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02601 ATGCAAATTCCATTTAACAACCCATCTCAATCATCACTCATTATATTCATCTTTATCCTCTTTTTCTCTCATGGTACAAACGCTTTTGGCACTATGGGACCAATCTCAGCTTCATTTGGAGAATACGAATTGTTTTGCTCTATCGATGCAAGTGGTAAACAAGATGTTATTTGTTGGGGCAAAAACACTACTTCACCGCAACCTCTTTCTTCTTCTTCTTATGTTTCCAACATCCCTGCCATGTCAGCACTTTCTGGCGGTGAAGGTTTTCTCTGCGGCATTTTAGCAAACACTTCGCAGGCGTTTTGTTGGCCTGCTACTTCCAAACAAAATTCAGATCCCGTTTTGGTTCCACCGTCGTATCGGAGCACCGCTTACTCCCACATCGCTGCCGGTAAGAATCATGTCTGCGCTGTTAGAGGATCTTACTACTCCGATCGTGATTCCGGAACTGTAGATTGTTGGCAAATCACGAAAACAACTAAGAATGGTACTTTAATGGCGGTGCTTAATGATTCGTTTTCTGATCAATCGATTACTAATCTTGAAATGAATCGGGTTGTTTCCGGTGAAGGGTTTACCTGCGGTGGGGTTAGAGATGGAGGGTTGGTTTGTTGGGGACCCAATTCGGAAAATATGAAAGTTTCCAATGTTTCGGATAGTTTTTCTGTTTTGGTGGCAGGGAGAACCGCTGTTTGCGGTGTTTCGAATATCTCCGGCGATGTGAGATGTTGGGGCGATATAGAATCTCCGTCAAAGGAGATTCGTTTTGTTTCACTCTCGGGTGGGGCACGCCATTTCTGCGGCATTCGAGAGGATAATCATGTGGTTGAATGTTGGGGTGATTTGAATTCATCTTTGGTTCCAAAAGGTAATGGCTTTATGGCAATTGCTTCTTCTGATTATACAACTTGTGGCATAAGAGAAGATGATCTTCTTCTAGATTGTTGGTTGGTCAACGCTTCAAAGCCTGATTTTGACCCTCCTTTGGAGCTTTCAAGTCCTGGTCTTTGTAGGTCAAGTTCTTGTGAAGTTAATGAGTTTGTTTTCAATGTTAGTGTTCTTAATGAACCAGATTTAACAAGTTTATGTGTTAGACAAGATTTGAGGATTTGTTCACCTTGTGGTTATAATTGTTCACAAGGTTCCTTTTTGTCTAGTCCTTGTACTCAAAATTCTGATAGAGTTTGCACAGCTTGTTCTCTTTGTCAGAACAGTTCTTGTCTGAGTGTTTGTAAACTTCATTCTTCAAATGGATTTTTACATTGGCATCATCTTCGTAGATGGGTTGTCATAATCGGATCTTCTGTTTTGTGTTTGTTGCTGATTTTGACTTGTGGGTGTATTTTTCGATGTTTGGTTGGTTCAAGGGGACAACATAGGACAAAGAAACAATCCAAGTCTTGTATTGGTAAAGATGAACAAGAGGATGATGATGATGCGAATGGCAATGGTAATGGTCTTCTTCATTCGTCTTCTTCGGCTGCGTCTTGTCCTGGATTGCCTCAGGTTTTCAGGCTTTCGGAATTGAAAGATGCTACCAATGGTTTCAAGGAGTTTAATGAGCTTGGGAGGGGAAGTTATGGATTTGTTTACAAAGCTACTTTGGCGGATGGGAGAGTGGTTGCCGTGAAAAGAGCGAATGCTGCCACGATAATACACACCAACAATCGTAACTTCGAAATGGAGTTGGAAATTTTGTGCAAAATTCGTCATGTTAATATTGTTAACTTGTTGGGTTATTGTGCCGAGATGGGGGAGAGGTTACTTGTTTATGAGTATATGTCTCATGGGACACTTTCTGATCACATTCATGGTGGTCTTTCTCCTCTTAATTGGAGTTTAAGGCTTAAGATAGCTATGCAATCTGCAAAGGGTATAGAGTACCTTCACAAAGAACTGTTGCCTCCAATTGTTCATAAGGATCTCAAGAGTTCCAATATTCTTTTGGATTCAGAATGGGGGGCCAGAGTTTCCGACTTTGGACTTCTTACTTCGAGTGATAAAGATCTTAAAGGCGACATGGAAAGTGATGTTTACAGCTTCGGGATTGTATTGTTGGAAATTCTAAGTGGAAGGAAGGCTTTTGACAGAGATTTTGATCCACCTAATGTTGTCGAGTGGGCAGTGCCTTTGATCAAACAAGGTAAGGCAGCTGCCGTAATCGATCGCTACGTCGCTCTTCCAAGAAATGTCGAGCCTTTGCTTAAACTCGGCGATATAGCAGAGCTTTCTGTAAGAGATAATCCGAGTGAGCGTCCATCTATGTCGGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTAATCTTATAA 2322 0.4152 MQIPFNNPSQSSLIIFIFILFFSHGTNAFGTMGPISASFGEYELFCSIDASGKQDVICWGKNTTSPQPLSSSSYVSNIPAMSALSGGEGFLCGILANTSQAFCWPATSKQNSDPVLVPPSYRSTAYSHIAAGKNHVCAVRGSYYSDRDSGTVDCWQITKTTKNGTLMAVLNDSFSDQSITNLEMNRVVSGEGFTCGGVRDGGLVCWGPNSENMKVSNVSDSFSVLVAGRTAVCGVSNISGDVRCWGDIESPSKEIRFVSLSGGARHFCGIREDNHVVECWGDLNSSLVPKGNGFMAIASSDYTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRSSSCEVNEFVFNVSVLNEPDLTSLCVRQDLRICSPCGYNCSQGSFLSSPCTQNSDRVCTACSLCQNSSCLSVCKLHSSNGFLHWHHLRRWVVIIGSSVLCLLLILTCGCIFRCLVGSRGQHRTKKQSKSCIGKDEQEDDDDANGNGNGLLHSSSSAASCPGLPQVFRLSELKDATNGFKEFNELGRGSYGFVYKATLADGRVVAVKRANAATIIHTNNRNFEMELEILCKIRHVNIVNLLGYCAEMGERLLVYEYMSHGTLSDHIHGGLSPLNWSLRLKIAMQSAKGIEYLHKELLPPIVHKDLKSSNILLDSEWGARVSDFGLLTSSDKDLKGDMESDVYSFGIVLLEILSGRKAFDRDFDPPNVVEWAVPLIKQGKAAAVIDRYVALPRNVEPLLKLGDIAELSVRDNPSERPSMSDIASWLEQIVKDGLIL 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02601 773 MobiDBLite consensus disorder prediction 465 484 - -
Trre2g02601 773 ProSiteProfiles Protein kinase domain profile. 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02601 773 FunFam serine/threonine-protein kinase-like protein CCR1 487 594 - -
Trre2g02601 773 Gene3D Transferase(Phosphotransferase) domain 1 595 672 - -
Trre2g02601 773 Gene3D Transferase(Phosphotransferase) domain 1 673 770 - -
Trre2g02601 773 Gene3D Phosphorylase Kinase; domain 1 489 594 - -
Trre2g02601 773 Gene3D - 28 179 IPR009091 -
Trre2g02601 773 SMART serkin_6 517 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02601 773 SUPERFAMILY RCC1/BLIP-II 35 284 IPR009091 -
Trre2g02601 773 FunFam Serine/threonine-protein kinase-like protein CCR1 672 770 - -
Trre2g02601 773 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Trre2g02601 773 Pfam Protein tyrosine and serine/threonine kinase 521 667 IPR001245 GO:0004672|GO:0006468
Trre2g02601 773 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 342 397 IPR001368 GO:0005515
Trre2g02601 773 SUPERFAMILY Protein kinase-like (PK-like) 494 764 IPR011009 -
Trre2g02601 773 Gene3D - 180 327 IPR009091 -
Trre2g02601 773 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 767 - -
Trre2g02601 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02601 Trre-Chr2 22334436 22336757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02601 5 767 Receptor kinase-like Gene Family AT3G59420 30.695 1.03e-109 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Trre2g02601 PK_Tyr_Ser-Thr 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02601 - - gmx:100802259 1167.53