Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02586 ATGTTCTTCATAGGTTATAATGAATTCTGCTTTGTGCTTTCTTCATCTGTTTTGTATTTGCAGCTGACTATGTGGGACTTGAGAATGAAAGAAAATGGTGGTTGTGTTCATCGGATTAGTGGTACCCCTGGTGATACCTTATATTCTGTTTGCAGTTCTTCCACTGGTGAGGCACGTCCTGTTTCGAAGAGGAAAGGTGACACTGCTATTGGTGGAACTTTGAATGAGAATGATGTTTTGCATGTTAAGGCAACAAAAGTTGGATCAGAAAGTGCTCTTTCGCAGATTGTTCGACTTGTTGAGTCTGCTCAGATGGCTAAGGCTCATGTGCAGAAGTCCGCTGATCGTATTTCCAAATTATTTGTGCCTTTGGTGATTTTGATCTCATTCTCAACTTGGCTTGCCTGGTTTTTAGCTGGAAAATATCATGCTTACCTGAAATTGTGGATACCGTCTTCCATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGAATATTTGTCATGGTTATTGCTTGCCCTTGTGCTTTGGGTTTAGCCACGCCTACTGCTGTTATGGTTGGCACCGGTGTTGGTGCATCTCAGGGTGTATTGATCAAAGGGGGGCAAGCTTTGGAAATTGCGCATAAGGTAAATTGCATTGTTTTTGACAAGCCGGGTACTCTCACTATTGGGAAACCGGTAATAGTAAATACCAAACTATTGACAAAAATGGTGCTCTGGGAATTCTATGAACCTGTGGCTGCAGCAGACGTAAGCACATGCCCCTCATCTCCTTGTAAAAGCCTTAGCCTCAGTTATAGTTATAGAGAACAGTTGTTTTCCTATTAA 828 0.4227 MFFIGYNEFCFVLSSSVLYLQLTMWDLRMKENGGCVHRISGTPGDTLYSVCSSSTGEARPVSKRKGDTAIGGTLNENDVLHVKATKVGSESALSQIVRLVESAQMAKAHVQKSADRISKLFVPLVILISFSTWLAWFLAGKYHAYLKLWIPSSMDSFELALQFGIFVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEIAHKVNCIVFDKPGTLTIGKPVIVNTKLLTKMVLWEFYEPVAAADVSTCPSSPCKSLSLSYSYREQLFSY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02586 275 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 55 252 - -
Trre2g02586 275 Gene3D - 181 257 IPR023214 -
Trre2g02586 275 SUPERFAMILY Calcium ATPase, transduction domain A 52 100 IPR008250 -
Trre2g02586 275 SUPERFAMILY Calcium ATPase, transmembrane domain M 102 206 IPR023298 -
Trre2g02586 275 Gene3D - 44 104 - -
Trre2g02586 275 Pfam E1-E2 ATPase 54 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02586 Trre-Chr2 22214074 22216113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02586 55 253 Primary Pumps ATPases AT1G63440 84.422 2.95e-110 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02586 K17686 - gmx:100816893 341.658