Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02585 ATGTTCTTCATAGGTTATAATGAATTCTGCTTTGTGCTTTCTTCATCTGTTTTGTATTTGCAGCTGACTATGTGGGACTTGAGAATGAAAGAAAATGGTGGTTGTGTTCATCGGATTAGTGGTACCCCTGGTGATACCTTATATTCTGTTTGCAGTTCTTCCACTGGTAATATTGCCGTTGGTGGGATTGATCGTACAGTGACTATTTATGATCCTCGCATGAGACATCCAGGCACTAGCTTAGAGGTAAAAATTGGAGAACATTCAATTCACAAGAGGAAAGGTGAGGCACGTCCTGTTTCGAAGAGGAAAGGTGACACTGCTATTGGTGGAACTTTGAATGAGAATGATGTTTTGCATGTTAAGGCAACAAAAGTTGGATCAGAAAGTGCTCTTTCGCAGATTGTTCGACTTGTTGAGTCTGCTCAGATGGCTAAGGCTCATGTGCAGAAGTCCGCTGATCGTATTTCCAAATTATTTGTGCCTTTGGTGATTTTGATCTCATTCTCAACTTGGCTTGCCTGGTTTTTAGCTGGAAAATATCATGCTTACCTGAAATTGTGGATACCGTCTTCCATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGAATATTTGTCATGGTTATTGCTTGCCCTTGTGCTTTGGGTTTAGCCACGCCTACTGCTGTTATGGTTGGCACCGGTGTTGGTGCATCTCAGGGTGTATTGATCAAAGGGGGGCAAGCTTTGGAAATTGCGCATAAGGTAAATTGCATTGTTTTTGACAAGCCGGGTACTCTCACTATTGGGAAACCGGTAATAGTAAATACCAAACTATTGACAAAAATGGTGCTCTGGGAATTCTATGAACCTGTGGCTGCAGCAGACGTAAGCACATGCCCCTCATCTCCTTGTAAAAGCCTTAGCCTCAGTTATAGTTATAGAGAACAGTTGTTTTCCTATTAA 945 0.4212 MFFIGYNEFCFVLSSSVLYLQLTMWDLRMKENGGCVHRISGTPGDTLYSVCSSSTGNIAVGGIDRTVTIYDPRMRHPGTSLEVKIGEHSIHKRKGEARPVSKRKGDTAIGGTLNENDVLHVKATKVGSESALSQIVRLVESAQMAKAHVQKSADRISKLFVPLVILISFSTWLAWFLAGKYHAYLKLWIPSSMDSFELALQFGIFVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEIAHKVNCIVFDKPGTLTIGKPVIVNTKLLTKMVLWEFYEPVAAADVSTCPSSPCKSLSLSYSYREQLFSY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02585 314 Gene3D - 12 103 IPR015943 GO:0005515
Trre2g02585 314 Gene3D - 107 265 - -
Trre2g02585 314 SUPERFAMILY Calcium ATPase, transduction domain A 95 139 IPR008250 -
Trre2g02585 314 Pfam E1-E2 ATPase 95 231 - -
Trre2g02585 314 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 95 291 - -
Trre2g02585 314 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 245 IPR023298 -
Trre2g02585 314 SUPERFAMILY WD40 repeat-like 22 82 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02585 Trre-Chr2 22214074 22216113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02585 95 292 Primary Pumps ATPases AT1G63440 84.343 9.79e-109 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02585 K17686 - gmx:100816893 339.347