Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02576 ATGGAGGGAATTACCAATGGCCATGCTGAAGCAACTTTTTGCGTGACCAAAAGTGTTGGTGATCCACTCAACTGGGGTGCAGCCGCGGAGTCGTTGATGGGGAGTCATTTGGATGAGGTGAAGCGTATGGTGGAGGAATACCGTAATCCATTGGTTAAAATTGGCGGCGAGACGCTTACCATTGCTCAGGTGGCTGGAATTGCTTCTCATGATAGTGGTGTGAGGGTTGAGCTGTCTGAGTCCGCCAGGGCCGGCGTTAAGGCGAGTAGTGATTGGGTGATGGACAGCATGAACAATGGGACTGATAGTTATGGTGTTACCACCGGTTTCGGCGCCACCTCTCACCGGAGAACCAAGCAGGGTGGTGCCTTGCAGAAGGAGCTAATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGAACACCTATTGGAGTTTCAATGGATAACACACGTTTAGCTCTTGCTTCAATTGGAACCCAAGCTTGGATTACGGTTTCAAGGGATCGGAAATTGCCATGGCTTCCTATTGTTCTGAGTTACAATATCTTGCTAATCCTGTCACCACCCATGTCCAAAGTGCGGAGCAACACAATCAAGATGTTAACTCTTTGGGTTTGA 618 0.4838 MEGITNGHAEATFCVTKSVGDPLNWGAAAESLMGSHLDEVKRMVEEYRNPLVKIGGETLTIAQVAGIASHDSGVRVELSESARAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTPIGVSMDNTRLALASIGTQAWITVSRDRKLPWLPIVLSYNILLILSPPMSKVRSNTIKMLTLWV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02576 205 SUPERFAMILY L-aspartase-like 21 151 IPR008948 GO:0003824
Trre2g02576 205 Gene3D - 12 163 IPR024083 -
Trre2g02576 205 PANTHER HISTIDINE AMMONIA-LYASE 139 159 IPR001106 -
Trre2g02576 205 Pfam Aromatic amino acid lyase 59 136 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02576 Trre-Chr2 22088614 22092444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02576 16 139 Monolignol Biosynthesis Gene Families AT3G53260 75.806 2.83e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02576 K10775 - gmx:100811101 232.261