Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02572 ATGAAATCAAGATTTTTGAGAGGGTGTATTAACAAATGCAAGAAAGTGGGAAGTATAGTAAAAACTTGTGCTACTTGTGAAGATTGTTGTGAAAGGGGTTTATGGTCTTCTCTTCATGAAAGTAGCTCCATACCAAGTGATGTTCCAAAAGGTCACATGGTTGTATACATAGGTGAGAATCACAAGAGATATGTGATTAAAATTGCATTACTTCATCATCCACTTTTCAAGGCCTTGTTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCTGATTCAAAACTATGTATTCCTTGTGATGAACATCTTTTCCTAAGTGTCCTTCGTTGTGCTAGTTCTCCACACAATCAAAGGGTGTGTTTGTGTCTCTGA 372 0.3683 MKSRFLRGCINKCKKVGSIVKTCATCEDCCERGLWSSLHESSSIPSDVPKGHMVVYIGENHKRYVIKIALLHHPLFKALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPHNQRVCLCL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02572 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 107 IPR003676 GO:0009733
Trre2g02572 123 Pfam Auxin responsive protein 37 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02572 Trre-Chr2 22062919 22063290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02572 10 118 Calmodulin-binding Proteins AT4G34750 38.596 1.02e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02572 K14488 - gmx:100812927 217.624