Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02564 ATGTCCAAATCAATTTCAAACCCTACAATCACTTCACAACAACTTGTTATCCATACATTCTCTCAATCAGAAACCAAACCTTCCACCACCGTCGCCACCACCGGTTCTGATCCCAATGCTCAACTTTCCACCGTCAAAAGAAAAACCTCCTCCCGTTCCACCAAAGACCGTCACACCAAGGTGAACGGTCGTGGCCGCCGTGTCCGTATGCCGCCTCTCTGTGCTGCTAGAGTTTTCCAGCTGACTCGTGAGTTAGGTCACCGTTCCGATGGTGAAACAATCGAGTGGCTTCTCCGACAAGCTGAGCCGGCTATCAAAGCTGCAACCGGTACTGGCACTGTTCCCGCCGGTCCTGTTTCAACAACCTCGCCTGCGTCTTCTTCCTCGAAGCCGTCTGTGTCCTGCAATGTTGTTCGGCCGTTGTCGTCTGTTGGTCCCAGCGGTGGAGGAATGTTTGCTGCTGCTTCTCTGTCGCTACAGCAGCCGAGTTGCCGGCTTGATCTCTGTCAGCCGTCTGGACTGGAGTATGCTGCGGTGAATAGGTACCATCATATGCCGTTCACGGCGTTGCTGTTGCAACCGACTACGGTGGAGGAGAATCAGCAAGAAGAAACTCTGAGCCTGAACGAACAATGA 636 0.5299 MSKSISNPTITSQQLVIHTFSQSETKPSTTVATTGSDPNAQLSTVKRKTSSRSTKDRHTKVNGRGRRVRMPPLCAARVFQLTRELGHRSDGETIEWLLRQAEPAIKAATGTGTVPAGPVSTTSPASSSSKPSVSCNVVRPLSSVGPSGGGMFAAASLSLQQPSCRLDLCQPSGLEYAAVNRYHHMPFTALLLQPTTVEENQQEETLSLNEQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02564 211 MobiDBLite consensus disorder prediction 109 135 - -
Trre2g02564 211 MobiDBLite consensus disorder prediction 51 65 - -
Trre2g02564 211 ProSiteProfiles TCP domain profile. 54 108 IPR017887 -
Trre2g02564 211 MobiDBLite consensus disorder prediction 23 48 - -
Trre2g02564 211 MobiDBLite consensus disorder prediction 114 135 - -
Trre2g02564 211 Pfam TCP family transcription factor 53 151 IPR017887 -
Trre2g02564 211 MobiDBLite consensus disorder prediction 23 66 - -
Trre2g02564 211 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 137 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02564 Trre-Chr2 21981550 21982185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02564 54 196 TCP Transcription Factor Family AT2G37000 50.968 2.62e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre2g02564 TCP 3.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02564 - - cam:101510590 265.774