Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02556 ATGCTTAAATCTTTGGTTAGAAAAATACAAAAGGGACTCTCACTAATTGTTCCCAAAAGCTACTTCAATGAAGGTGTTAGGGAAGGATATTTTGTTGTGGTTGCAATGAAAGATGGAGAAACCAGAAGGTTTATGATTGGGTTAGAGTACTTGAGAGATCCTATATTTTTGAGATTACTTGATCAAGCTAGAGAAGAGTATAGTTTTAGACATCAGGGAACTCTTGCGGTCCCTTGTGGGCCTCAAGAATTGCAAAATATTCTACATAGTTCTAGAGGGTAG 282 0.3723 MLKSLVRKIQKGLSLIVPKSYFNEGVREGYFVVVAMKDGETRRFMIGLEYLRDPIFLRLLDQAREEYSFRHQGTLAVPCGPQELQNILHSSRG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02556 93 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
Trre2g02556 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02556 Trre-Chr2 21880492 21880773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02556 1 88 Calmodulin-binding Proteins AT4G34750 37.079 1.09e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02556 - K14488 tpra:123895427 176.022