Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02555 | ATGGTTCTTTCTTTTGTTGAGAAGATACAAAAAGGTATCTCACATTTTGTACACAAAAGACATGATTTCAGTGAAGAGCTGGTTCCAGAGGATGTAAGGGAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGTGAAATGAAAAGGTTTATCATTGGTTTAGAGTACTTGAGTGATCCTGAATTTTTGGGACTACTTGATCAAGCTAAGGAAGAGTATGGTTTCATGCACAAAGGAGCTATTGCTGTTCCTTGTCAGCCTCAACAATTACAGAACATTATAGATGGTCAGAGATGA | 297 | 0.3737 | MVLSFVEKIQKGISHFVHKRHDFSEELVPEDVREGYFAVVAMKDGEMKRFIIGLEYLSDPEFLGLLDQAKEEYGFMHKGAIAVPCQPQQLQNIIDGQR | 98 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02555 | 98 | Pfam | Auxin responsive protein | 26 | 94 | IPR003676 | GO:0009733 | |
Trre2g02555 | 98 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 22 | 92 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02555 | Trre-Chr2 | 21878660 | 21878956 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02555 | 29 | 86 | Calmodulin-binding Proteins | AT3G43120 | 48.276 | 4.24e-12 | 57.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02555 | - | K14488 | gmx:100775971 | 134.035 |