Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02554 | ATGGTTAAATCTTTGATTAGGAAAATACAAAAGGGACTCTCACTAATTGTTCCCAAAAGCTACTTCAATGAAGGTGTTAGGGAAGGATATTTTGTTGTGGTTGCAATGAAAAATGGAGAAACCAGAAGGTTTATGATTGGGTTAGAGTACATGAGAGATCCTGTATATTTGAGATTACTTGACCAAGCTAGAGAAGAGTATGGTTTTAGACATCAGGGAACTCTTGCGGTCCCATGTGGGCCTCAAGAATTGCAAAATATTCTACATAGTTCTAGAGGGTAG | 282 | 0.3794 | MVKSLIRKIQKGLSLIVPKSYFNEGVREGYFVVVAMKNGETRRFMIGLEYMRDPVYLRLLDQAREEYGFRHQGTLAVPCGPQELQNILHSSRG | 93 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02554 | 93 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 14 | 86 | IPR003676 | GO:0009733 | |
Trre2g02554 | 93 | Pfam | Auxin responsive protein | 22 | 88 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02554 | Trre-Chr2 | 21864278 | 21864559 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02554 | 34 | 88 | Calmodulin-binding Proteins | AT4G34750 | 39.286 | 3.47e-09 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02554 | - | K14488 | tpra:123895427 | 173.326 |