Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02554 ATGGTTAAATCTTTGATTAGGAAAATACAAAAGGGACTCTCACTAATTGTTCCCAAAAGCTACTTCAATGAAGGTGTTAGGGAAGGATATTTTGTTGTGGTTGCAATGAAAAATGGAGAAACCAGAAGGTTTATGATTGGGTTAGAGTACATGAGAGATCCTGTATATTTGAGATTACTTGACCAAGCTAGAGAAGAGTATGGTTTTAGACATCAGGGAACTCTTGCGGTCCCATGTGGGCCTCAAGAATTGCAAAATATTCTACATAGTTCTAGAGGGTAG 282 0.3794 MVKSLIRKIQKGLSLIVPKSYFNEGVREGYFVVVAMKNGETRRFMIGLEYMRDPVYLRLLDQAREEYGFRHQGTLAVPCGPQELQNILHSSRG 93
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02554 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 86 IPR003676 GO:0009733
Trre2g02554 93 Pfam Auxin responsive protein 22 88 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre2g02554 Trre-Chr2 21864278 21864559 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02554 34 88 Calmodulin-binding Proteins AT4G34750 39.286 3.47e-09 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02554 - K14488 tpra:123895427 173.326