Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02551 ATGCTTAGTTCTTTTGTTGGGAAAGTACAAAAAAGTTTTTCAGTCTTGGTACCAAGAAAGCATGCATTGAGCTACTTTAATGAAGATCATTCCACAACTGAGGTTGTAGCCGATGATGTTATGAAAGGTTATTTTGCTGTTCTTGCAAGGAAGGGTGAGGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACTGATCCTGCTTTTGTTGGATTACTTGATGAAGCTTGGAAGGAATATGGTTTCCGACAGAAGGGAACTCTTGTTGTTCCATGTCGGCCGATAGAATTACAGAACATTTTAGATGGTCGGAAAACATAA 324 0.3796 MLSSFVGKVQKSFSVLVPRKHALSYFNEDHSTTEVVADDVMKGYFAVLARKGEETRRFIVGLDYLTDPAFVGLLDEAWKEYGFRQKGTLVVPCRPIELQNILDGRKT 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02551 107 Pfam Auxin responsive protein 32 102 IPR003676 GO:0009733
Trre2g02551 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02551 Trre-Chr2 21830688 21831011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02551 39 94 Calmodulin-binding Proteins AT3G43120 46.429 1.98e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02551 - K14488 tpra:123895443 179.104