Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02537 ATGGCCAAATATTGCTTCAACCTCCAAACAATGACGTATTCCTCACCCAGACAGCCCATCCACCTTCCAACTGATCCCAACCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCTTCCCTCGCCGACACCATCGCCATCGCCAACGCTCACTCTGGCGACTCCCTAACCTTCCGCCAACTCAAAATCCAAGTCTCTTCCCTCTCTCAATCCTTGCTCCGTATCGGAATTCGACAAGGCGATATCATTTTGCTATTTGCACCTAATTCCATACGTTTCTCCGTTTGTTTCCTTGCTATAGTCGCCATAGGTGCTATTGTCACCACCTGTAGTCCTTTATACACCGTCTCCGAACTCTCCAAGCAAATTCAAGACTCCAAACCAAAGCTTGTTGTAACTGTTTCGGAGCTTTTCAACAAAATAGAAGAATTGAATATTGATTTACCTTTCGTATTGCTCAACGATTCTTTGAACAAGTTCGGTTCTAGGTTTTTGAACTATGATGATCTGACCGGAGATTCGTACAATAGCTCCGACGAGATTACGGAGAACAGTGTTGTTTCGCAATCCGACGTGGCGGTAATTCTGTACTCTTCAGGTACCACAGGGAGAAGTAAGGGAGTGATGTTGACTCACCGGAATTTCATAGCGACGGCGGTGGCAGGAGTGGCGGATCAAGACCGTTACGGCGAGGGGAAGAACGTGTTCCTGTGTTTTGTGCCGATGTATCACGTGATGGGATTGGCGGTTATAACGTACACACAGTTGAGGAGAGGGAACACGGTGGTGTCGATGGGGAGATTTGATCTGGAGAAGACTTTAGCGGCCGTGGAGAAGTTTAGGGTGACGCATTTGTATGTTGCTCCGCCGGTGATGGTGGAGCTGATCAAGAGGCGTGACATTGTGAGTGGTTATGATTTGTCGTCGTTGAAGCAACTTGCCGGCGGTGCTGCTCCGTTGGGGAAAGATGTGATGCAAGAGTGTGCTAAGATTCTTCCCCAAGTTGAAATCATTCAGGGGTATGGCATGACTGAAGCATGTGGACTTATTTCCTGTGAAAATCCAAAGGAACTGGAAGGAAACTTTCTTTCAGGTTCAACTGGAACATTAGTTCCAAGTTTAGAATCCCGAATTGTTAGTTTGGAAACATTGAATCCCCTCCCACCCAATCAATTAGGGGAAATTTGGCTAAGAGGACCCACTATGATGAAAGGATACTTTAACAATCCAGAAGCAACAAAACAGACCATTAATGATGAGGGTTGGATGATTACAGGTGATCTTGGTTATTTTGATGAAAATGGACAGTTATTTGTTGTGGATCGAATTAAAGAGCTCATCAAGTGTAACGGGTATCAAGTGGCACCAGCTGAACTTGAAGATTTACTAATTTCTCACCCTGAAATTTCTGATGCTGGTGTGATCCCATCCCCTGATGCCAAAGCCGGTGAGGTTCCGGTGGCTTATGTTGTTCGCTCACCCAATAGCTCGATAACCGGAGAAGACATTCAAAAGTTTGTAGCAAAACAGGTTGCACCATACAAAAGATTGCGAAGAGTGAATTTTATAGACAAGATTCCAAAGTTACCCACAGGAAAGATCTTAAGAAAGGATCTCGTAAGTCTTGATCGACAAATAAAATCAAAGTTATAG 1653 0.4501 MAKYCFNLQTMTYSSPRQPIHLPTDPNLSLTSFLFQSTSSLADTIAIANAHSGDSLTFRQLKIQVSSLSQSLLRIGIRQGDIILLFAPNSIRFSVCFLAIVAIGAIVTTCSPLYTVSELSKQIQDSKPKLVVTVSELFNKIEELNIDLPFVLLNDSLNKFGSRFLNYDDLTGDSYNSSDEITENSVVSQSDVAVILYSSGTTGRSKGVMLTHRNFIATAVAGVADQDRYGEGKNVFLCFVPMYHVMGLAVITYTQLRRGNTVVSMGRFDLEKTLAAVEKFRVTHLYVAPPVMVELIKRRDIVSGYDLSSLKQLAGGAAPLGKDVMQECAKILPQVEIIQGYGMTEACGLISCENPKELEGNFLSGSTGTLVPSLESRIVSLETLNPLPPNQLGEIWLRGPTMMKGYFNNPEATKQTINDEGWMITGDLGYFDENGQLFVVDRIKELIKCNGYQVAPAELEDLLISHPEISDAGVIPSPDAKAGEVPVAYVVRSPNSSITGEDIQKFVAKQVAPYKRLRRVNFIDKIPKLPTGKILRKDLVSLDRQIKSKL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02537 550 CDD 4CL 22 539 - -
Trre2g02537 550 Gene3D - 12 444 IPR042099 -
Trre2g02537 550 SUPERFAMILY Acetyl-CoA synthetase-like 23 543 - -
Trre2g02537 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 540 - -
Trre2g02537 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 444 - -
Trre2g02537 550 FunFam 4-coumarate--CoA ligase 2 445 545 - -
Trre2g02537 550 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Trre2g02537 550 Gene3D - 445 547 IPR045851 -
Trre2g02537 550 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Trre2g02537 550 Pfam AMP-binding enzyme 42 449 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02537 Trre-Chr2 21692313 21697538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02537 13 550 Monolignol Biosynthesis Gene Families AT4G05160 57.798 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02537 K01904 - psat:127097095 870.537