Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02512 ATGAGAAACAAACAAAATGTTTCAAACATTCCCATCACCGAAAGGCCAAGAAATCAACCGGTATTTCGCAGCATGGACACTTTAAAGGCAGCTTTCACCGAATTCATGTCCACATTCATCTTTGTCTTTGCCGCCACAGGCTCTCGAATAGCCGTAAACAAAATCACCGGCGATGCTGTGTTCGGTCTCATTGCCATCGCCATCGGTCATGTGTTTGCCCTCACCGCCGCAGTTTCTATCGGAATCAGGTATAATGACATGAATCCATACACCTGTTGTGGGCACCTCAACCCTGCTGTTACGTTTGGTGCTTTTATAGGCGGAAATTTACACATCTTGCGTGCTTTGATCTACTGGATTGCTCAGATCCTTGCCTCCATTGCTGCCTGTGGGCTCCTCGTGTTCTTTCCCGGTGGACAGAAGGTGCCCGTTTTTAAACTTTCAAATGGAGTGGGAGTTAAAAACGCATTGGTGTTGGAGATGGTGATGACGTTCATTTTAGTGTTCACAATGTGTGCCACTGTCTTTGACCCCAGAGCCACCAAAAAATACAATGCACCACCAATGAATATTGTGGTCAAGGACCAAAATAAGGTAGTTCAAATGCCTCCTTTGAACAGGTTTTCACCACTTGCCATTGGTCTCATTGTTGGAGCAAATATTTTGGTTGGTGGACCTTTTGATGGAGCATCTATGAACCCGGCTTTGTCGTTTGGACCTGCACTCGTTACTTGGAGCTGGAGCAACCATTGGGTCTATTGGGTTGGGCCTCTCATTGGTGGTGGGATTGCTGGTTTTGCTTATGATTTTGCATTTATTACTAAGTAA 828 0.4553 MRNKQNVSNIPITERPRNQPVFRSMDTLKAAFTEFMSTFIFVFAATGSRIAVNKITGDAVFGLIAIAIGHVFALTAAVSIGIRYNDMNPYTCCGHLNPAVTFGAFIGGNLHILRALIYWIAQILASIAACGLLVFFPGGQKVPVFKLSNGVGVKNALVLEMVMTFILVFTMCATVFDPRATKKYNAPPMNIVVKDQNKVVQMPPLNRFSPLAIGLIVGANILVGGPFDGASMNPALSFGPALVTWSWSNHWVYWVGPLIGGGIAGFAYDFAFITK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02512 275 CDD MIP 29 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02512 275 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Trre2g02512 275 PANTHER AQUAPORIN-8 23 273 IPR034294 -
Trre2g02512 275 SUPERFAMILY Aquaporin-like 24 273 IPR023271 -
Trre2g02512 275 Gene3D Glycerol uptake facilitator protein. 18 275 IPR023271 -
Trre2g02512 275 Pfam Major intrinsic protein 23 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02512 Trre-Chr2 21415384 21416729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02512 26 275 Major Intrinsic Protein MIP AT3G26520 52.174 4.82e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02512 K09873 - gmx:100820403 280.411