Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02493 ATGCCATCATCATCTCTCTCTCATCTTTCTCTCTCTTTCCTCCCCAAACTACCACACACTACTACTCTCCCTCAAAAATCTTATCCACTTCATCATCTCTCAATAAAATCATCAATCAACAACAAAACCCCACAAAAAATCACAAAAACAAGTTCATGGGTTAGTCCAGATTGGCTCACTTCACTATCCAAGTCAGTAACAACAGGAAAAGATGATGATTCTGGTATTCCTATAGCAAGTGCTAAGCTTGATGATGTTTCTGATCTTTTGGGTGGTGCTCTTTTTCTTCCTTTGTTTAAATGGATGGATGAGTATGGTCCCATTTATCGTTTAGCTGCTGGTCCTAGAAATTTTGTTGTTGTTAGTGATCCTGCTATTGCTAAACATGTGCTTAAGAATTATGGTAAATATGGTAAAGGGCTTGTTGCTGAAGTTTCTGAGTTTCTTTTTGGTTCTGGTTTTGCTATTGCTGAAGGTTCTCTATGGACGGCAAGACGCAGAGCTGTGGTTCCATCTCTTCACAAACGGTACTTATCTATTATGGTGGATAGGGTGTTTTGTAGATGTGCCGAGAGATTAGTAGAGAAGCTACAATCTGATGCAATTAATGGAACTCCTGTTAACATGGAGGACAAGTTTTCTCAATTAACCCTTGATGTTATCGGTTTATCTGTATTCAACTACAACTTTGATGCACTGAATTCAGACAGTCCTGTTATTGAAGCTGTTTACACTGCGCTAAAAGAGGCGGAGGCTCGCTCAACCGATCTCTTACCGTATTGGAAGGTTAATTTTCTTTGTAAGATAATCCCAAGACAAATAAAGGCTGAAAATGCCGTTAGTATTATCAGGAAAACAGTAGAAGATCTTATTGCAAAATGCAAAGAGATTGTAGAGTCTGAGGGTGAAAGAATTGATGCTGATGAATATGTCAATGACGCTGATCCTAGTATTCTACGATTTTTACTTGCCAGCAGAGAAGAGGTTTCAAGTGTGCAATTAAGGGATGATCTTTTGTCAATGTTAGTCGCTGGTCATGAGACCACCGGTTCAGTGCTGACTTGGACGCTTTATCTTCTAAGTAAGGATCCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGTGTCCTTCCTATGAAGATATTAAAGATCTTAAGTTCTTGAATCGCTGTATCATTGAGTCACTCCGACTTTATCCACATCCTCCTGTATTGATAAGAAGATCTCAAATTCCTGATGAACTTCCGGGTGATTACAAAATCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTAAGGTTTGGGATAGGGCCGAAGAGTTTTTGCCAGAAAGATTTGATTTGAATGGTCCAGTGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTTAGCGGAGGGCCACGAAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTACCGTTGCGCTTGCAGTCTTTCTACAGCACATGAACTTTGAGCTGGTCCCTGATCAAAATATCAGCATGACTACTGGTGCAACAATACATACCACAAATGGCTTGTACATGAAACTTAGCAGACGGTTGAAATAG 1617 0.3952 MPSSSLSHLSLSFLPKLPHTTTLPQKSYPLHHLSIKSSINNKTPQKITKTSSWVSPDWLTSLSKSVTTGKDDDSGIPIASAKLDDVSDLLGGALFLPLFKWMDEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGSGFAIAEGSLWTARRRAVVPSLHKRYLSIMVDRVFCRCAERLVEKLQSDAINGTPVNMEDKFSQLTLDVIGLSVFNYNFDALNSDSPVIEAVYTALKEAEARSTDLLPYWKVNFLCKIIPRQIKAENAVSIIRKTVEDLIAKCKEIVESEGERIDADEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDPSSLAKAQEEVDRVLQGRCPSYEDIKDLKFLNRCIIESLRLYPHPPVLIRRSQIPDELPGDYKINAGQDIMISVYNIHHSSKVWDRAEEFLPERFDLNGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAVFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02493 538 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 SUPERFAMILY Cytochrome P450 90 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 CDD CYP97 96 530 - -
Trre2g02493 538 PANTHER CYTOCHROME P450 FAMILY 4 100 536 - -
Trre2g02493 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Trre2g02493 538 Gene3D Cytochrome P450 77 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02493 538 Pfam Cytochrome P450 98 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02493 Trre-Chr2 21211469 21216451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02493 29 536 Cytochrome P450 AT3G53130 79.843 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02493 K09837 - gmx:100803324 905.975