Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02480 ATGGAACTTTCTCTTCTCAGCCATCAGCTCAATCCTTTGCTCCTTCATTGCCCTCTCACAACCAATTTCTTGACAAGAACTCAAAAAAGAATTTACAACAAAACTTCAAATAAGTTATTACAATGCAGCTGTTCACAATCTTCCTCCAATAATACTGTTGTAGAACCAATCACTTTGTCTTTACAGATTGAAGGAAGGAGAGCATTACTCACTTGTCTCCTCACAACATTTGTTGGAGTTTATGCATGTGATGGGGCTGAAGCTGTTAGCACTAGTAGAAGAGCTTTACGAGGAGCCAAAATTCCTGAAAGTGATTACAAAACCTTGCCTAATGGTCTGAAGTACTATGATTTGAAGGTTGGGGATGGAGCTGAAGCTGTGAAAGGATCGCGTGTCGCAATTCACTATGTTGCAAAATGGAGGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCGAATCTAAGAGAGGAAATGTCCTAAAAGGTTTGGATGTAGGAGTAGAGGGCATGCGAGTTGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAGAGGAGTCCAAGAAATCCCTCCAAATGCAACAATAGAGATGGATATTGAACTGCTTGCCATCAAACAAAGCCCATTTGGAACTGCCGTAAAGATTGTTGAAGGCTAA 711 0.4233 MELSLLSHQLNPLLLHCPLTTNFLTRTQKRIYNKTSNKLLQCSCSQSSSNNTVVEPITLSLQIEGRRALLTCLLTTFVGVYACDGAEAVSTSRRALRGAKIPESDYKTLPNGLKYYDLKVGDGAEAVKGSRVAIHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESKRGNVLKGLDVGVEGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIEMDIELLAIKQSPFGTAVKIVEG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02480 236 SUPERFAMILY FKBP-like 99 223 - -
Trre2g02480 236 Gene3D - 86 230 IPR046357 GO:0003755
Trre2g02480 236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
Trre2g02480 236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 220 IPR001179 GO:0003755
Trre2g02480 236 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 102 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02480 Trre-Chr2 21070841 21074055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02480 129 223 Calmodulin-binding Proteins AT5G48570 40.206 3.20e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02480 - - gmx:100815603 364.77