Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02465 ATGGAAACCAATGGAATGTTTTCTACCATAACTACTTCTGGTTTGTTAGGTGTTATTGATTCCCCTTTACCCCAACAGCAGCAACAGCAACAGCAACAGCAACAGCAACAACAACAACAACAGAATCTTCCTAATCAGCAGCAAAATCCTCATCTTTTGCATCATTCCCAAGTTGTTTCTTATGCTCATGACACTGACACACATCAACAACAACAACAGCAACAACAATTGCATCCTTCAATGAAACATGGGTACCCTCCTTTTTCTTCATCCAAGAACAAAATTCAGCAGCAGCAACAACAACAAAGCTCTCAGGTGAGTGATGAAGATGAACCAAATTTTCCAACTGAAGAAAGTTCTGGTGATCCAAAGAGAAAGATTTCACCTTGGCAAAGAATGAAATGGACTGATACAATGGTAAGGCTTTTGATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTTCTGAAGGGACTGATCCAAATAAGAAAAAGTCTAGTGGTTTGTTACAGAAGAAAGGTAAATGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTTTCACCTCAACAATGTGAAGATAAGTTTAATGATTTGAATAAAAGGTATAAGAGAGTGAATGATATACTTGGAAAAGGAACAGCTTGTAGAGTTGTTGAGAATCAGAATTTGTTGGATACAATGGATTTGACACCAAAGTTGAAAGATGAAGTTAGGAAATTGCTTAATTCTAAGCATCTTTTCTTTAGGGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGTGGTGCTGCTGGTGCTGGTGGTGCTGCTGGTTCTAATGTTCATCATCAAGTGGAAGGTGGAACAACAACACCACCTCAGAATCAACCTCAACATCATCATCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACATTGTTTTCATTCATCAGAGAATGGTGTAGGAAATTTAGGTGGTTCAAGAGGAGAAGGTTTAAGGATGTTGAAAATTGGTAGTGGAGATGTTGCAGAGGAAGATGATGAAGATGAAGACGAAGAATCAGAAGACTATTCAGATGAAGATGGAGATGAATCAGGAGAAGGTGTTTCAAAGGGTCATCAAATAATTAGTCATTTAAATGATCAAGATGAAGAAGAGAATGATGGAAAATCATCAAGAAAAAGACCAAGAAAAGGAAGATATTCATTTTCTATGTCACCATCATCATCATCATCATTAACATTGATGCATCAAATGAACAATGAAATAAGTGGTGTTTTTCAAGATGGAGGTAAGAGTCCATGGGAGAAAAAACAATGGATAAGAAATAGGATATTGCAATTGGAAGAACAAAAATTAAGGTATGAATCACAAGCTTTTGAGCTTGAAAAACAAAGGTTGAAATGGCAAAGGTATAGTAGTAAGAAAGAAAGGGAAATGGAAAGAGCTAAACTTGAGAATGAAAGAAAAAGATTAGAAAATGAGAGAATGGTTTTGCTTATTAGGAAGAAGGAAATTGAATTGATGAATCTTCAACAACAACAGCAGCAGCAACAACATTCTTCAACCTAG 1575 0.3683 METNGMFSTITTSGLLGVIDSPLPQQQQQQQQQQQQQQQQQNLPNQQQNPHLLHHSQVVSYAHDTDTHQQQQQQQQLHPSMKHGYPPFSSSKNKIQQQQQQQSSQVSDEDEPNFPTEESSGDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPNKKKSSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMDLTPKLKDEVRKLLNSKHLFFREMCAYHNSCGHGGAAGAGGAAGSNVHHQVEGGTTTPPQNQPQHHHQQQQQQQQQQQQQQHCFHSSENGVGNLGGSRGEGLRMLKIGSGDVAEEDDEDEDEESEDYSDEDGDESGEGVSKGHQIISHLNDQDEEENDGKSSRKRPRKGRYSFSMSPSSSSSLTLMHQMNNEISGVFQDGGKSPWEKKQWIRNRILQLEEQKLRYESQAFELEKQRLKWQRYSSKKEREMERAKLENERKRLENERMVLLIRKKEIELMNLQQQQQQQQHSST 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02465 524 MobiDBLite consensus disorder prediction 20 129 - -
Trre2g02465 524 MobiDBLite consensus disorder prediction 343 364 - -
Trre2g02465 524 Coils Coil 474 522 - -
Trre2g02465 524 SUPERFAMILY beta-sandwich domain of Sec23/24 288 316 - -
Trre2g02465 524 MobiDBLite consensus disorder prediction 266 413 - -
Trre2g02465 524 Coils Coil 446 466 - -
Trre2g02465 524 Gene3D - 135 208 - -
Trre2g02465 524 MobiDBLite consensus disorder prediction 20 110 - -
Trre2g02465 524 MobiDBLite consensus disorder prediction 280 324 - -
Trre2g02465 524 MobiDBLite consensus disorder prediction 378 394 - -
Trre2g02465 524 PANTHER F16F4.11 PROTEIN-RELATED 7 513 - -
Trre2g02465 524 Pfam Myb/SANT-like DNA-binding domain 132 257 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02465 Trre-Chr2 20925429 20927003 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre2g02465 Myb_DNA-bind_4 6.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02465 - - tpra:123902711 738.413