Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02460 ATGGCGTGCATGTGGCGCAAGAATGCCTTCAGCGGCAAGAAACTTCCATCAGACGTGCCGCGAGGCCACTTGGCTGTGATAGTAGGAGAGGCAAACAGGAGGTTTGTCATAAGAGCTGACTACCTGAACCATCCAGTGCTTCAACAACTGCTTGATCAAGCATATGAAGGATATGGCTTCAACAAGAGTGGTCCTCTTGCTATACCTTGTGACGAGTTCCTATTTGAAGACATTCTTCAATCCCTTGGTGGAGGAACTCGCACTCGCCGATCCTCTTCTCCTGTGCTTACAAAAAAGCTAGATTTGAGCTTTTCCAAAGACTCTGAACCATTACTTGATGTCTTTGACAGCAAAAGGAGCAACAACTACAAGCATTAA 378 0.463 MACMWRKNAFSGKKLPSDVPRGHLAVIVGEANRRFVIRADYLNHPVLQQLLDQAYEGYGFNKSGPLAIPCDEFLFEDILQSLGGGTRTRRSSSPVLTKKLDLSFSKDSEPLLDVFDSKRSNNYKH 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02460 125 Pfam Auxin responsive protein 13 82 IPR003676 GO:0009733
Trre2g02460 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02460 Trre-Chr2 20884084 20884461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02460 1 93 Calmodulin-binding Proteins AT4G34750 53.125 7.92e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02460 K14488 - gmx:100777611 179.104