Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02445 ATGGAAATGCCTGCTAGAAGATCTAATTACTCTCTTCTAAGTCAAGTTCCCGACGATCAATTTTCATACGCTGCCGGAGCTAGTGCTCCGTCGTCATCCAGTGACGGAAAAGCTAGCAGAGGTGGTAAATTAGATAGAGGTTTCGATTGGGAGTTAGTCGGCGATCATAGGGGGTCGACTCAACAAGGGAACAATCGGATCGGGAATTTGTATTCGTCGATCGGGTTACAGAGACAGTCAAGTGGAAGTAGCTACGGTGAAAGTTCGTTGTCAGGTGGTGGTGAATATTATGCTCAGACGTTGTCTACGGCGGCGGCTAGTGAGGTTGATGCGTTTGGATATTTGCATGATGATGGATTTAAGGTTGGTGAGGTGAGAAATAAGTTGTCTGAAGGTCCGCCGTGGACGGGGGGATCGTCTGGGAAGAGCTGGGCTCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTGGCTTTGGCGTTGCGGCTTTCGTCGGATGCTACTTGTGCTGATGATCCGAATTTTCTGGATCCGGTGCCGGATGAAGCGGCTTCGAGGATATCGTCTTCGCCGGAGGCCATTTCTCATAGATTCTGGGTGAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGCTTTTACCTAATTCACGGGATGGATTCCTATGTCTGGACCGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCATCAGTTGATAGTCTAAAGTCTGTACATCCCCGCATTGATTCTTCCCTTGAAGTAGTTTTGGTCGATCGACGCAGCGATGCCAGCTTGAGAGAACTGCAAAACATGGTTCATAACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTGTCCAAGCTGGTTTGCAACTGTATGGGGGGTTCAGCTTCTGCTGGGGAGGATGAGCTTCTTTCTTTCTGGAGGGATTGCAGTAATAATCTGAAAGATTGCTTAGGATCTGTTGTTTTCCCCATAGGTAGTCTATCTGTTGGCCTTTGCAGGCACCGTGCAATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGCTGTAAATATTGCAAACGAGATGATGCTGCTTCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAATATCTAGTTGATTTAATTGGGAAGCCAGGACAATTATGCGAGCCTGATTCCTTGCTCAACGGTCCCGCTTCCATCTCATTTTGTTCACCTTTGCGCTTTCCAAGACTTAAACCAGCTGAAACTGCAATTGATTTCAGGACACTTGCCAAACAGTATTTCTCAGACTGTCTGTCTCTTGAGCTTTTCTTCGACAACAGTTCTGCAGAACAGTTCGATGCGAAATGCAATGAAAGGAGTAACGTTAGGCCGATTTCAACTGACAGTAACAGAAGCTTGTATCCACAAGTTTCTCTTTTGAATACTCATGATCAAGCTTCTGAAACATATATGTTATGCAACCCCCCTCAGAACATTACAGACTCAACAACTGTGGCCAAATATCCACCCCCTTTAAAGAATAAGCGTCCTGTTGCTATTGCCAATGATGAAGTCATTGAGGGCAGGAGGTTTATTGAAGCAAGTCAACTGCTTGCTAGCAAGCCTAGTCGAGATGTTGCCTTTGACATGGAGGATTTGGCCATACCATGGAACGATCTTGTTTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAGGAATTCATGCGGGAGGTTGCAATAATGAAACATTTGCGGCATCCAAACATTGTTTTATTAATGGGGGCAGTCACACAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGACCCGGTGCCAAGGAAGTGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTACGATGTGGCAAAGGGAATGAATTATCTTCACAAGCGTAACCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATACACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGCGACGAGCCATCAAATGAGAAGTCTGATATTTACAGCTTTGGTGTAATCATGTGGGAGCTTGCAACATTGCAACAGCCGTGGGGTAATTTGAATCCGGCACAGGTTGTTGCTGCTGTTGGCTTCAAGGGAAAAAGACTTGAGATCCCGCGCGAGTTGAACCCCCAAATAGCTGCAATAATTGAGGCCTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTGCCAGTATTATGGATTCTCTGAGGTCATTACTCAAACCTCCTACACCTCAACCTGGTCTTCCAAACATACCTCTCACCTGA 2508 0.4573 MEMPARRSNYSLLSQVPDDQFSYAAGASAPSSSSDGKASRGGKLDRGFDWELVGDHRGSTQQGNNRIGNLYSSIGLQRQSSGSSYGESSLSGGGEYYAQTLSTAAASEVDAFGYLHDDGFKVGEVRNKLSEGPPWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDEAASRISSSPEAISHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDSLKSVHPRIDSSLEVVLVDRRSDASLRELQNMVHNISCSSITTTEVVDQLSKLVCNCMGGSASAGEDELLSFWRDCSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDAASCLVRFGLEREYLVDLIGKPGQLCEPDSLLNGPASISFCSPLRFPRLKPAETAIDFRTLAKQYFSDCLSLELFFDNSSAEQFDAKCNERSNVRPISTDSNRSLYPQVSLLNTHDQASETYMLCNPPQNITDSTTVAKYPPPLKNKRPVAIANDEVIEGRRFIEASQLLASKPSRDVAFDMEDLAIPWNDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFMREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVIMWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLPNIPLT 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02445 835 ProSitePatterns Protein kinases ATP-binding region signature. 568 589 IPR017441 GO:0005524
Trre2g02445 835 SMART serkin_6 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02445 835 Gene3D Phosphorylase Kinase; domain 1 555 640 - -
Trre2g02445 835 CDD STKc_MAP3K-like 568 816 - -
Trre2g02445 835 FunFam Serine/threonine-protein kinase CTR1 641 826 - -
Trre2g02445 835 Pfam Ethylene-responsive protein kinase Le-CTR1 191 396 - -
Trre2g02445 835 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 143 820 - -
Trre2g02445 835 Gene3D Transferase(Phosphotransferase) domain 1 641 825 - -
Trre2g02445 835 PRINTS Tyrosine kinase catalytic domain signature 677 695 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 PRINTS Tyrosine kinase catalytic domain signature 724 734 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 PRINTS Tyrosine kinase catalytic domain signature 636 649 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 ProSiteProfiles Protein kinase domain profile. 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02445 835 MobiDBLite consensus disorder prediction 23 42 - -
Trre2g02445 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Trre2g02445 835 Pfam Protein tyrosine and serine/threonine kinase 563 816 IPR001245 GO:0004672|GO:0006468
Trre2g02445 835 FunFam Serine/threonine-protein kinase isoform 1 552 640 - -
Trre2g02445 835 SUPERFAMILY Protein kinase-like (PK-like) 541 815 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02445 Trre-Chr2 20584106 20592897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02445 1 827 MAP Kinase Kinase Kinase AT5G03730 64.918 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trre2g02445 PK_Tyr_Ser-Thr 5.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02445 K14510 - gmx:100800648 1329.69