Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02441 ATGAAGATGATGATAATAGAGTGTTGTATCTCTAGAAGTACAACACGTGTATGTGCCACTCTCCCTCAGACAAAATATCCATGTAACATTACTAGAAGACCTTTATCTTTGTCTCTCATCTCCACCACTTTCTCTTCTTTAATCTTCTCACTTACTCCTCCACCTTCTTCTTCTTCTCCATTAACTTCTTCAAAATTTCCAATAGCTGATTTTTTTGAGCTCCCCAATTCTGGTGGTGTTAAGGCTTTGGAACTCCTTGTTGGTTCTGGTGAAGTTCCTCAAGATGGGGATCAGGTTGAGATTCATTACTATGGTAGACTAGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGATCACAAAGATGAGAACGGTGATCCTAATCCTTTCGTCTTTGTCCTTGGCTCCGGAAAGGTAATTGCTGGAATTGATGTGGCAGTGAGATCGATGAAAATAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGATATCAAAACACATCACAGGAACCTCTCCCACCTAATTTCTTTGACAGGCAGAGGCTGTTCACTACAATTTTTAATCCAACTCGTCTTGCAAATGGTGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGTCTCAGGCATCAGTGA 657 0.4079 MKMMIIECCISRSTTRVCATLPQTKYPCNITRRPLSLSLISTTFSSLIFSLTPPPSSSSPLTSSKFPIADFFELPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIAGIDVAVRSMKIGGIRRVIIPPSLGYQNTSQEPLPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02441 218 Gene3D - 69 215 IPR046357 GO:0003755
Trre2g02441 218 SUPERFAMILY FKBP-like 77 216 - -
Trre2g02441 218 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 92 213 IPR001179 GO:0003755
Trre2g02441 218 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 20 218 IPR044197 -
Trre2g02441 218 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 96 216 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02441 Trre-Chr2 20502801 20509356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02441 55 216 Calmodulin-binding Proteins AT5G48570 31.288 2.03e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02441 - - gmx:100808927 333.183