Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02429 ATGGCAGCAGCAGCAGCTCATAAGCACTTACACGAACTACTCAAAGAAGATCAAGAACCATTCCTTCTTACAAACTACATTTCAGAAAAACGTAATAATTTACTAAAAAGACCTTCCTCAAACACCACTTTACAATTCAAGAAACAAAAACCACCACCACCAACAACAACAACAACAATCGTTAATCTCTGCAAAAATGCTTGTTTTTCCTCATTCCAAAACACACCAGATATAAAAAATTCACCACTTTTTGAATTCTCTTCACCAACAAAAACCCCATCTTCCAATGCTATCTTCCTTCAAATCCCTACTAAAACGGCGTCGCTTTTACTCGAAGCAGCTCTCAAAATTCAGAATAATAAAAAACCCCATTACCAAAACAAAAACAAATCTTTTGGGGTTTTTGGTTCATTGTTGAAGAAACTAACACAAAGAAACAGAAACAAAAAGAATGAATCATCATCAATTGAAGGTAATGATAATAATGTTTCTGTTAAGGATATTTTGAGATGGGATTCTTCTATTGGAAAAAGAAACATAAAATGTTACAATGAAATCAGAGTGTGTTCTTGTGAAGTGGGGTTCACATGTTCTTCTTGTAATGGAAGACATAGTAATAGTGCTGTTTGGTCTGAGAGTAATGAAGATAAATCGATGGATATGGAAACTTCGAGTAGTGGAAATTCTTGTGATTCTGTTGAAGAGTTTGTGATGAATAAGAAGAAACAGAATGCAGTTTGTGATCATAATGGGTTTTTCTGTGAAAGCCCTTTTCGTTTTGTTCTTGAAAGGAGTGCGTCTTCTTCTTCTGGCCACCGTACGCCGGAGTTTTCTTCGCCGCCGGATTCACCTAGTCGCCACCAAACAGAGGACAAAGAAAATAATGGAGTTGACGGTGAGAACAAATTCCAATCAGGTGAAGATGAGGAAGAGAAGGAACAGTGTAGTCCAGTATCTGTTTTAGATCCACCCTTTCAGGATTATGATGATGATGATGATTGCCATGAAAACGACGATGAAGAAGGTGATTTTGATTTGGAGTGTAGCTACGCCAATGTACAAAGAACCAAGCAACATCTATTAGATAGACTTCGTAGATTCGAGCAACTTGCAGAGTTGGATCCATTAGAACTTGAGAAAAGAATGCAAGAAGACAACGAGCACGAAACATTTTTCGAAGACGATGATGATGAAAGTGATGCACCATGTGAAGAGAAGGCTCTAAGAGAAATAGTCAATGAAATCCTATGTCATTCAAGTGTTCATGATAGATGGCAAGATCAAGAAGTTCTTAAGAGACTTGTTTGTGATCTCATTAAGGAAGAAGAGAAAGAACTTAATTGTTCACAAGATATGAACAATGTAATGAAAAGGGTATGCAAGAAAATGGAATTGTGGAAAGAAGTAGAATCAAACACTATTGATATGATGATAGAAGAGGATTTTACTAGAGAGGAAATTGGGTGGAAGAAAAATAATGTGGAGACAAAAGAGCTAGCTGGAGAGGTTGAGCTTGCTATCTTTTGCCTTTTAGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1566 0.3653 MAAAAAHKHLHELLKEDQEPFLLTNYISEKRNNLLKRPSSNTTLQFKKQKPPPPTTTTTIVNLCKNACFSSFQNTPDIKNSPLFEFSSPTKTPSSNAIFLQIPTKTASLLLEAALKIQNNKKPHYQNKNKSFGVFGSLLKKLTQRNRNKKNESSSIEGNDNNVSVKDILRWDSSIGKRNIKCYNEIRVCSCEVGFTCSSCNGRHSNSAVWSESNEDKSMDMETSSSGNSCDSVEEFVMNKKKQNAVCDHNGFFCESPFRFVLERSASSSSGHRTPEFSSPPDSPSRHQTEDKENNGVDGENKFQSGEDEEEKEQCSPVSVLDPPFQDYDDDDDCHENDDEEGDFDLECSYANVQRTKQHLLDRLRRFEQLAELDPLELEKRMQEDNEHETFFEDDDDESDAPCEEKALREIVNEILCHSSVHDRWQDQEVLKRLVCDLIKEEEKELNCSQDMNNVMKRVCKKMELWKEVESNTIDMMIEEDFTREEIGWKKNNVETKELAGEVELAIFCLLVDEFSEELVC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02429 521 MobiDBLite consensus disorder prediction 268 284 - -
Trre2g02429 521 Coils Coil 139 159 - -
Trre2g02429 521 MobiDBLite consensus disorder prediction 268 341 - -
Trre2g02429 521 PANTHER OS04G0572500 PROTEIN 7 519 - -
Trre2g02429 521 MobiDBLite consensus disorder prediction 325 341 - -
Trre2g02429 521 Pfam Domain of unknown function (DUF4378) 378 514 IPR025486 -
Trre2g02429 521 MobiDBLite consensus disorder prediction 285 316 - -
Trre2g02429 521 Coils Coil 350 370 - -
Trre2g02429 521 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02429 Trre-Chr2 20373887 20379605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02429 5 352 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.946 9.96e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02429 - - gmx:100814311 498.434