Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02425 ATGGGATCATTCTCGGGCATTTGTGAAATTGTTGAAGCAGGGGAAGATCTAAATATAGCGAAAGATGCAGGGATATATCAGTCCAGTTCTGGATATAGTGTGTCTGAGAAAAATCAGAAGCTTCCTGCGGTGAAACTGGGATACAAGGATAATCTAGATAATGATATTAATAAGCTGTTTGAATCGATTACTCTCAAGTCTTCATCAAGGGATTTGAGCTTTCTACCAGATGGAACAAGTCCTAAGATGAAAAATGCATTAAAAAAGCCAATGACAATGGGTGTACCTCGATCTCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGCATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGCAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCTGGACCTTCTAATGTTGAGAGTAAAGGGAGTTCAACTGAAATATCTCTGGTGCTAGAAGAAGACAAGTCACTTGCCTTGAATAAAGAATCTCCGTCTCATCAAACTTCCAAAAGCACACCATTGAGCCAAAATGCTCATTCTTCCAAAATCGCAGTTGCAACTGCACAAAATGATACAGGGGCTTCGTTGATGCAAAGTGATTTGGAATGTTCGTCAAGTAAAGTTGGAATTTCAGGGGTTTCAGCCCAACCATCAGAACCTACTCAAATAGAAAATCAAATGTCCGCTTCCTCTTCATCTTGTTGTAACACCGATGGAAGTAAAGTAGAGTTGCCTGAGAAAGATTCTTCACCTAAAAAATTAGGAAATAAAGCATCTATGTCGAAGAATGTGCGGAAAGGTATGTTACAAACAACATCTTCCTCTTCAGTGAATGGCAATAGAGTGTGCAAACTTTCGCGCAATAGCCCCCGAACAATAAAGTCGGTCATAAAAACCAAGAGTTTAGGTAAGAAGAAACTTAAGCAGGGTTCTGATTCTGCTTTACATGTTCCTCCGTCCGATGAGGGAAACAACAACCCAGTTCCCGCTGCAACTCCACTTGTTTGTGAGAGATGTTGGTGTGAAATCGAAAATACAAATATAGAAAGCAGCAAAGGTATTATATCATCGGGTTCTCCAAGCCCTGCAGATGGAATAAACTTGAAAAGTGTACTCTCTGGGCCAGCATCAACAGGTTGTAATAGAGGCATAGAAGTTACAAAAGTGAAAAAGAATACCAGATTGAAAGAGCAACTTGAATTTTCGCAGAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACAAGCGACGAGAGTAATATCAGTGGTTCTAGTTGTGGCAATAGGCCTCACATGTCGAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGTGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACTGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACATTGTATGCACAGTTTACATCAGAAAATCTATCATGTCTGGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTACGTAGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACAGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACGCTTCTGAAATCATCTTCTGATATGGATCCTGCCAAGGTTTCTGGTACATGCACAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGCGGCAAAAGCAAGGAAACTAAAAGCTGATCTTGCTGCTCATATCAGATCTTTGCCGCAGCTTGTGGCAGAGCCCACGGATGCAAGATCAAATTCCTTTGTTGGTACTCATGAATACCTAGCACCTGAGATAATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACATTTGGTGTTTTCCTTTATGAACTTTTATATGGTAGAACACCCTTCAAAGGTTCTAACAATGAAGAAACATTAGCCAACGTCGTCTTGCAAAATCTCAGATTCCCCGATAGCCCTTTTGTTAGTTTCCAAGCAAGGGATCTTATTAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTAGGTACAGAGAAAGGTGCTGCCGAGATTAAACAACATCCCTTCTTCGAGGGCCTTAATTGGGCATTAATACGTTGTGCTATCCCACCGGAACTTCCTGACCTTTGTGAATTTGAATTGGGACTTTCAGACATGATTGCACAGTCACAAAGCAAGGATGGCAAATTTTTAGAGTGTACAACAACTGGAGAACAAGTGGAATTTGAGTTGTTTTAG 2619 0.4131 MGSFSGICEIVEAGEDLNIAKDAGIYQSSSGYSVSEKNQKLPAVKLGYKDNLDNDINKLFESITLKSSSRDLSFLPDGTSPKMKNALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSAASPRISEAGKIQTLYNSVVTDARRSGPSNVESKGSSTEISLVLEEDKSLALNKESPSHQTSKSTPLSQNAHSSKIAVATAQNDTGASLMQSDLECSSSKVGISGVSAQPSEPTQIENQMSASSSSCCNTDGSKVELPEKDSSPKKLGNKASMSKNVRKGMLQTTSSSSVNGNRVCKLSRNSPRTIKSVIKTKSLGKKKLKQGSDSALHVPPSDEGNNNPVPAATPLVCERCWCEIENTNIESSKGIISSGSPSPADGINLKSVLSGPASTGCNRGIEVTKVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNISGSSCGNRPHMSKDFRWQAIRDAQMQHGVLGLRHFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDMDPAKVSGTCTKSSCIEPFCIEPSCQVACFSPRFLPPAAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGLSDMIAQSQSKDGKFLECTTTGEQVEFELF 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02425 872 MobiDBLite consensus disorder prediction 424 458 - -
Trre2g02425 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Trre2g02425 872 PANTHER FLIPPASE KINASE 1-RELATED 207 838 - -
Trre2g02425 872 MobiDBLite consensus disorder prediction 234 309 - -
Trre2g02425 872 Gene3D Transferase(Phosphotransferase) domain 1 710 832 - -
Trre2g02425 872 MobiDBLite consensus disorder prediction 76 100 - -
Trre2g02425 872 Pfam Protein kinase domain 486 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02425 872 Pfam Protein kinase domain 714 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02425 872 MobiDBLite consensus disorder prediction 326 352 - -
Trre2g02425 872 MobiDBLite consensus disorder prediction 289 309 - -
Trre2g02425 872 FunFam serine/threonine-protein kinase D6PK-like 569 636 - -
Trre2g02425 872 SUPERFAMILY Protein kinase-like (PK-like) 461 833 IPR011009 -
Trre2g02425 872 MobiDBLite consensus disorder prediction 234 265 - -
Trre2g02425 872 MobiDBLite consensus disorder prediction 187 207 - -
Trre2g02425 872 ProSiteProfiles Protein kinase domain profile. 485 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02425 872 MobiDBLite consensus disorder prediction 185 207 - -
Trre2g02425 872 FunFam Serine/threonine-protein kinase D6PK-like 483 568 - -
Trre2g02425 872 CDD STKc_phototropin_like 483 836 - -
Trre2g02425 872 SMART serkin_6 485 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02425 872 MobiDBLite consensus disorder prediction 424 459 - -
Trre2g02425 872 Gene3D Transferase(Phosphotransferase) domain 1 565 633 - -
Trre2g02425 872 FunFam serine/threonine-protein kinase D6PK-like 712 835 - -
Trre2g02425 872 Gene3D Phosphorylase Kinase; domain 1 483 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02425 Trre-Chr2 20298896 20303646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02425 1 872 AGC Kinase Gene Family AT3G52890 53.501 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre2g02425 Pkinase 2.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02425 - K08286 gmx:100813470 1314.29