Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02410 ATGAATGATTCCTTTTTCCTTCATTTTCCTTCCCTTGTTTCGTTACCATTACCACCATTATTTTCCTTCTTATTATCTCCACCTCCCTCTTTTCCTTCTCACCCTCCACCTCCTCTTCTCATCACACACCAAGGTACAAAGAATTCTCTGATTCCACGCGAATTTTCATTTCCTCAAAAACAAAAAGAGAAAGAAAATTCTCTCAGATCCATGGCGGAAGAACAACCATGTCAAGCTCCTGAAGGTCACCGTCTCTGCGCAAACAACTGTGGTTTCCTCGGTAGTCCAGCAACCATGAATCTCTGCTCAAAATGCTACGGTGATATTCGTATAAAGGAACAACAAGATGCTTCAACAAAATCCACAATCGAAAACGCTCTTTTGTCATCATCTTCTTCCTCCGCCGTCGCATCGATTGCTTCTCCGTCGATTTCAACATCAGAGCCTATCGTTGTTTCCGTCGAATCAATCAACCCGACGCCAGCTTTGACGGAGATCGCGTCAAGTTCTATAACCGTCGGTTCGGTTGGTTCGTTTGGTTCGGTTCAACCGAACCGGTGCGTGACGTGTACAAAGCGCGTGGGGTTGACCGGGTTTAAGTGTAGATGCGGGTCTATGTTTTGTGGGTCCCACAGGTATCCGGAGAGACACGCATGTAGCTTTGATTTTAAGACGGTGGGGAGAGAGGAAATAGCTCGAGCGAATCCTTTGATTAGAGCGGAGAAGCTTCAGAGGATTTGA 741 0.4602 MNDSFFLHFPSLVSLPLPPLFSFLLSPPPSFPSHPPPPLLITHQGTKNSLIPREFSFPQKQKEKENSLRSMAEEQPCQAPEGHRLCANNCGFLGSPATMNLCSKCYGDIRIKEQQDASTKSTIENALLSSSSSSAVASIASPSISTSEPIVVSVESINPTPALTEIASSSITVGSVGSFGSVQPNRCVTCTKRVGLTGFKCRCGSMFCGSHRYPERHACSFDFKTVGREEIARANPLIRAEKLQRI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02410 246 ProSiteProfiles Zinc finger AN1-type profile. 181 227 IPR000058 GO:0008270
Trre2g02410 246 SMART A20_3 83 107 IPR002653 GO:0003677|GO:0008270
Trre2g02410 246 FunFam Zinc finger AN1-type containing 6 169 242 - -
Trre2g02410 246 Pfam A20-like zinc finger 84 106 IPR002653 GO:0003677|GO:0008270
Trre2g02410 246 SUPERFAMILY AN1-like Zinc finger 183 241 IPR035896 -
Trre2g02410 246 Gene3D - 175 242 IPR035896 -
Trre2g02410 246 PANTHER AN1-TYPE ZINC FINGER PROTEIN 82 246 - -
Trre2g02410 246 ProSiteProfiles Zinc finger A20-type profile. 80 114 IPR002653 GO:0003677|GO:0008270
Trre2g02410 246 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 85 131 - -
Trre2g02410 246 Gene3D - 69 143 - -
Trre2g02410 246 SMART AN1_Zf_4 187 224 IPR000058 GO:0008270
Trre2g02410 246 Pfam AN1-like Zinc finger 189 223 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02410 Trre-Chr2 20101957 20103534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02410 71 246 C2H2 Transcription Factor Family AT3G52800 51.613 4.95e-52 165