Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02366 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTTGCTAAGAAGGTAAAAGCTAGTGGTGGAGCTGACCCTAACACTAACCATGAATGTTTGCTTAAGGGGTATGAAGAAGAATTCTCCACAAACAAAACTCCAACTGGTTACTTTGCACTTTATGTGGGGGAAGAGCATCAGAGAAATGTGGTTCCAACAAGTTATCTTTCACACCCTTTATTCAAGATGTTGCTAGAGAAATCATACAATGAATTTGGGTTTGAGCAGAGGAATGGTCTTGTAGTTCCATGTAGTGTTTCAACATTTCAAGAGGTTGTAAATGCTATTGAATGTAATAATGGCAAGTTTCACTTGGGGAAGATTTTTCATGATGCTGTTTCAAGTGTAGAAAAATAG 390 0.3744 MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYEEEFSTNKTPTGYFALYVGEEHQRNVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKIFHDAVSSVEK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02366 129 Pfam Auxin responsive protein 25 106 IPR003676 GO:0009733
Trre2g02366 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02366 Trre-Chr2 19638199 19638588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02366 45 115 Calmodulin-binding Proteins AT5G20810 50.704 3.34e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02366 K14488 - gmx:100790208 180.259