Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02330 ATGTCTCTACTCACCCAAAAACTTCTCTTGATGTGTGTGTTGTTGCTGGTATCAGCGAACAATGTTCTTGGAGAGTCTGAAAATTGTTTTCTTACGGATCATATGACCGTGAATATTACAAATACTTTGTCTGGAAATTTAGACTTAACCATTCATTGCAAATCTAAAGAAGATGATCTTGGAGAACATCTTCTTCATCATGGTGAGAGTTTTACTTGGAGATTTTGTAATAGGTTAATTGGTTCAACACTATTCTACTGTTCCTTTAGATGGAATAATGAGTTACATTGGTACAATGCATACGATGAAGCTAGGGATCTTTATCATTGTCATCCTAATAAGCATTGTATTTATCTTGTAAAACAATCTGGACCTTGTAAAATGATAGATTACGATGAAAGTCATGCTTTTTGCTATCCATGGAAGCAGTGA 432 0.3449 MSLLTQKLLLMCVLLLVSANNVLGESENCFLTDHMTVNITNTLSGNLDLTIHCKSKEDDLGEHLLHHGESFTWRFCNRLIGSTLFYCSFRWNNELHWYNAYDEARDLYHCHPNKHCIYLVKQSGPCKMIDYDESHAFCYPWKQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02330 143 PANTHER - 32 127 IPR010264 -
Trre2g02330 143 Pfam Plant self-incompatibility protein S1 36 141 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02330 Trre-Chr2 19335847 19336278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02330 11 141 Carbohydrate Esterase AT3G16970 33.333 8.62e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02330 - - tpra:123904838 149.443