Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02318 ATGTTGAAAAAATTGAAGTTTCTTTCTCTTTTCAAAAACACAGATGGAAAATCCTCTTCATCATGGACTTGGCCATCTTGCAACCAACCAAAAACCCTTTCTTTTAGAGCCAACAAAAACGACACCGTATTCAAAACTTGTGAATCTATATTAACTGAATTTTCTTTTGAGGATTTCAAACAAAGTGGTTTGCTTTCGGATCGGCTTTTCTTCGAACCGAACGAAACAAGCTCAATATTAAAGATCAAAGAAATAATTAATGTTTCGCCTAATGGAATAGTAAGCAACAACAATAATAGCATATTATTACCATTCGAAAACACCATTGAGTTTTCGATGGATTCGAAAAATCCTTATGAAGATTTCAAAGAATCGATTGTGGAAATGGTTAAGGCTCATGGCGTTAACAATTGGGAAACTTTGGAAAAGCTTTTGAGTTGGTATTTGGAAGTTAATGAGAAAAGCAATTATGGATTTATTATTGATGCTTTTTTTGATTTATTTGTTGAATTTAATCATGATTCACCAGATTGTTCTCCTTTATCGATTCAGAGTTGTTCTTCTCTTGATTCTTTGTGGAGCATACCTTGTGTTTCATCTTATAGTTCACCTTTGTAA 618 0.3269 MLKKLKFLSLFKNTDGKSSSSWTWPSCNQPKTLSFRANKNDTVFKTCESILTEFSFEDFKQSGLLSDRLFFEPNETSSILKIKEIINVSPNGIVSNNNNSILLPFENTIEFSMDSKNPYEDFKESIVEMVKAHGVNNWETLEKLLSWYLEVNEKSNYGFIIDAFFDLFVEFNHDSPDCSPLSIQSCSSLDSLWSIPCVSSYSSPL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02318 205 ProSiteProfiles OVATE domain profile. 111 170 IPR006458 -
Trre2g02318 205 Pfam Transcriptional repressor, ovate 115 170 IPR006458 -
Trre2g02318 205 NCBIfam uncharacterized plant-specific domain TIGR01568 111 170 IPR006458 -
Trre2g02318 205 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 170 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02318 Trre-Chr2 19244760 19245377 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre2g02318 Ovate 3.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02318 - - mtr:25483754 320.087