Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02316 ATGTCCACTTCCAAGAAAAAACTAACCTTAAACACTGTTTCCATAAACCTTGATTGTGGAACATGTAGAAGTCCAAAACTTAGTCTCATTTTTAACCCAATACCAAAACACAAAAAACTTCATCTTCATAAAAATTCTTCATCTTCTTCAACCCTTTGGAGAGAGAAAAACAGAGACAATATTGAAACTTCAACTAACACAAGTAACACTACACTAACAACAAACACTTCATTCGACTCCGAGAAATCGTCGTCGAAAGGATTTGGAAGAGTTGGAAATGAAGGTGTTGCTGTTGAGAAAGATTCTGATGATCCTTATCTTGATTTCAGACATTCAATGTTACAAATGATATTGGAAAATGAGATATATTCTAAGGATGATCTTAGAGAGCTTTTGAACTGTTTTCTTCAGCTGAATTCGAAGGAACATCATGGGATTATTATCAGAGCTTTTACTGAGATCTGGAATGGAGTTTTTTCTGTTAAGTCTGGTTTTTCACCTCAATCGTATGTCACGTGA 519 0.3468 MSTSKKKLTLNTVSINLDCGTCRSPKLSLIFNPIPKHKKLHLHKNSSSSSTLWREKNRDNIETSTNTSNTTLTTNTSFDSEKSSSKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSKEHHGIIIRAFTEIWNGVFSVKSGFSPQSYVT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02316 172 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 160 IPR038933 GO:0045892
Trre2g02316 172 Pfam Transcriptional repressor, ovate 102 158 IPR006458 -
Trre2g02316 172 MobiDBLite consensus disorder prediction 40 96 - -
Trre2g02316 172 NCBIfam uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Trre2g02316 172 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Trre2g02316 172 MobiDBLite consensus disorder prediction 62 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02316 Trre-Chr2 19220192 19220710 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre2g02316 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02316 - - tpra:123903281 283.493