Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02298 ATGGCGACAAAATCCTACCCCCGACAACGCAGTGACAATGACGACGGTTGCTGCTGCAGCAGATGTCTCTGCGGCTGTTTCAACTGCTGCTGCAGATGTCTCTGCAGCAGTATTGGCTACTTTTTCAACTACATCTTAAGCATAATCTGCAACATCATCGGTGCCATAGTAATATTCGCGGTTCTCTTCTGGCTTATGGTTCGTCCAAACTACATCAAATTCACTACAACTGATGCATCCCTTACCCAATTCAGTTTTAGAAACAACAACACACTTTACTATGATATTTCCATCAACACCGCGATCAGAAACCCTAATCGAAGAGTTGGTATCTACTATGATAACATCGAAATGCTTGCGTTTTATAAGGATGTTAGGTTTGGTTGTAAAACTTTTGGAAAATTCTTTCAGAGTCATAAGAATACGAGTTTCTTGAATGCGGTTTTTAGAGGTCAGCAAGTGATAATTACTTTAAATTCTGATCAGATTTCGGAACTGAATAAAGAGAAGAAAAATGGAATTTATGCAATTGTTGTCAAGGTTTTGCTTAAAGCAAGGTTTAAATTTGGTAAGTTCCAGACATGGGAAGGGAATCCTAAGGTTCGTTGTGATTTGCAGGTTTCTTTGAAATCCAGCAGTGAAATTTCATTAGGTAACGAATTTCTAGCCACTAATTGTGATTGGGATGACAAATGGTGGTTGTTCCGTTAG 711 0.391 MATKSYPRQRSDNDDGCCCSRCLCGCFNCCCRCLCSSIGYFFNYILSIICNIIGAIVIFAVLFWLMVRPNYIKFTTTDASLTQFSFRNNNTLYYDISINTAIRNPNRRVGIYYDNIEMLAFYKDVRFGCKTFGKFFQSHKNTSFLNAVFRGQQVIITLNSDQISELNKEKKNGIYAIVVKVLLKARFKFGKFQTWEGNPKVRCDLQVSLKSSSEISLGNEFLATNCDWDDKWWLFR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02298 236 PANTHER OS05G0367900 PROTEIN 29 213 IPR044839 GO:0098542
Trre2g02298 236 Pfam Late embryogenesis abundant protein 101 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02298 Trre-Chr2 19015370 19016080 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02298 66 218 SNARE and Associated Proteins AT1G32270 36.601 2.58e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02298 - - tpra:123896029 251.136