Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02296 ATGGCCGGTAACAAACTCCAATATGACGTTTATTTTATCCACCACCACGGATGCCTCGACGACCTCTGTAGCTGTCTCTGTCGCTTGTGGTGCATCCTCTTCAGCATCTTCATAATCATATTAGCAATCGTTGGTTTCTTAACCTGGCTCATCGTTCGACCTAACAAGGTCAATATTACCGTCACCAATGCATCTCTAACTCAATTCAATTTCGCAAACAGCAACACACTTCATTATGATCTCGTTGTTAACATCACCATCCGAAACCCTAATGGAAGACTTGGTATCTATTACGATGACATTAAAACGCTTGCGTTTTACAAAGATGTTAGATTTGGTTCTCAAACTTTAGGTAAATTCTTTCAGCATCGTAAGAGTACTAGTTTTTTGAATCCTAATTTTAAAGGTCAACAAGTTGTTCCTTTGAATTCAAGTCAGATTTCGGAGTTTGATAAAGAAAATAAAGATGGAGTTTTTGATATTGATGTGAAGCTTTTGCTTAATGTTAGGTTTAAATTTGGTTTGTTTAAGATTCGGAAAGCGAAACCTAAGGTTCATTGTGATTTGAAGGTTCCTTTGATATCAAGCAATGGAAAATTATTGGGTAATGGGTTTCAAGCTACTGATTGTTATTGGGATTATGATTGGCCTATTATAGTTTTCTGA 666 0.3649 MAGNKLQYDVYFIHHHGCLDDLCSCLCRLWCILFSIFIIILAIVGFLTWLIVRPNKVNITVTNASLTQFNFANSNTLHYDLVVNITIRNPNGRLGIYYDDIKTLAFYKDVRFGSQTLGKFFQHRKSTSFLNPNFKGQQVVPLNSSQISEFDKENKDGVFDIDVKLLLNVRFKFGLFKIRKAKPKVHCDLKVPLISSNGKLLGNGFQATDCYWDYDWPIIVF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02296 221 Pfam Late embryogenesis abundant protein 84 180 IPR004864 -
Trre2g02296 221 PANTHER OS05G0367900 PROTEIN 27 193 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02296 Trre-Chr2 19012549 19013214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02296 51 198 SNARE and Associated Proteins AT1G32270 36.667 6.21e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02296 - - aprc:113873272 220.705