Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02295 ATGGCCGGTAACCAACTCAACGGCGCTTATTACGGCCCATCAATTCCTCCGCCGCAACAAAAACCCTACCGCCGCCACCACAACGACGACGGCTGCGGCTTCTGCAGCTGTCTCTGCGGCTGTTTTCGAGGCTGTTGTGGCTGCATCTTCAACTGCATCTTAAGCATAATCTGCAAAATCCTAACCACAATCATCATCATAATCGTGATTCTCGGTTTCCTCTTCTGGCTCATCGTTCGACCTAACGTCGTCAATTTCACCGTCACTGATGCATCTCTTACTCAATTCAATTTCACAAACAACAACACACTTCACTACGATCTCGCCGTTAACATCACGATCCGAAACCCTAATCGAAGAGTTGGTATCTATTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGTTCGATTTGGTTCTCAAACTTTAGGTACATTCTTTCAGCATCACAAGAATACGAGTTTCTTGAACCCTAATTTCAAAGGTCAACAAGTTCTTCCTTTGAATTCAGATCAGATTTCAGAGTTTGATAAAGAAAAGAAAGATGGAGTTTTTGATATTGATGTGAAGGTTTTGCTTAATGTTAGGTTTAAATTGGGTTTGTTTAAGAGTGGTAAAGCGAAACCTAAGGTTCATTGTGATTTGAAGATTCCTCTGAAATCAAGCAATGGAAAATTATTGGGTAATGGGTTTGAAGCTACTGATTGTGATTGGGATTATAAATGGAAGTTGTTCCATTAG 744 0.4086 MAGNQLNGAYYGPSIPPPQQKPYRRHHNDDGCGFCSCLCGCFRGCCGCIFNCILSIICKILTTIIIIIVILGFLFWLIVRPNVVNFTVTDASLTQFNFTNNNTLHYDLAVNITIRNPNRRVGIYYDNIETLAFYKDVRFGSQTLGTFFQHHKNTSFLNPNFKGQQVLPLNSDQISEFDKEKKDGVFDIDVKVLLNVRFKLGLFKSGKAKPKVHCDLKIPLKSSNGKLLGNGFEATDCDWDYKWKLFH 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02295 247 Pfam Late embryogenesis abundant protein 111 212 IPR004864 -
Trre2g02295 247 PANTHER OS05G0367900 PROTEIN 56 223 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02295 Trre-Chr2 19006892 19007635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02295 78 225 SNARE and Associated Proteins AT1G32270 39.333 8.53e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02295 - - aprc:113873272 282.722