Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02294 ATGGCGGAAGCGCAACCCCGTAACTGTTGTAGTAGATGTTGTTGTTGCCTATTTGGCGTAATTTGGAAGCTCATTGTAGCAATAATCGTCCTCATAGTTCTTGCAATTCTCATTATTTTTTTCATTGTTCAACCCCGCTCCTTCAAATTCAGTGTCAAAGAAGCCAAACTAACCGAATTCAACTACAATAACAACACCCTCCGTTACAACCTTGTGCTCAATTTCACGGCCCATAACCCAAACAAAAAACTCGGCGTCATCTATGATTATATGGAGGGACATGTCTCCTATGAAGGAATTAGGTTTGCTTCAACGAATATTAGTGGTATTCTTTTCCGTCAAGACGCCAAAAAGACGGATCGTATGAGTGGTGTTTTCTCTGGACAACATGTTATGGTTTTTGATCATGATAAAGTTTCTGGCTTTGAACGTGATAAGAAAGATGAAGTTTTTCAAATTGATGTGAAGTTGTACTATAGGATTAGGTTTAAGCTTGGTGATTTTACTTTTAATGACGATATTAAAGGTAACATTAAATGTGGTCTTGATGTTCCTTTTGGATCTATTAATGGGACTAACGTCATGAATGCATTTGAACCCACCACATGCGATGTTAATTTGTGA 624 0.3782 MAEAQPRNCCSRCCCCLFGVIWKLIVAIIVLIVLAILIIFFIVQPRSFKFSVKEAKLTEFNYNNNTLRYNLVLNFTAHNPNKKLGVIYDYMEGHVSYEGIRFASTNISGILFRQDAKKTDRMSGVFSGQHVMVFDHDKVSGFERDKKDEVFQIDVKLYYRIRFKLGDFTFNDDIKGNIKCGLDVPFGSINGTNVMNAFEPTTCDVNL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02294 207 Pfam Late embryogenesis abundant protein 75 167 IPR004864 -
Trre2g02294 207 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02294 Trre-Chr2 19001292 19001915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02294 42 192 SNARE and Associated Proteins AT1G32270 32.903 2.57e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02294 - - tpra:123903297 290.812