Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02269 ATGGCGAATTTACCCCCTCAATCATCCTCTGTGAAGAAAGATGAATCGAATCCCAGTGTATGTCCATCCAGCACTGATTCGACCAGATTGATGTACGCAAAATGTCTTGTTACTGAACTGCACAATCCAGATCTACGAGAAAATGCTCTTGCTGTGCTCTCCAAGATGAAAGATTTATTTCAAGAACTTGCTCCATTATTATGGAATTCTTTTGGTATTATTGCAGTATTTTTACAGGAAATAATTATAATATATCCTGTACTTTCAACAACAGATCTTACTCCTGCACAATCAACTCGACTATGCAATGTTCTTGCTCTACTTCAGGTGACATGA 336 0.378 MANLPPQSSSVKKDESNPSVCPSSTDSTRLMYAKCLVTELHNPDLRENALAVLSKMKDLFQELAPLLWNSFGIIAVFLQEIIIIYPVLSTTDLTPAQSTRLCNVLALLQVT 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02269 111 MobiDBLite consensus disorder prediction 1 26 - -
Trre2g02269 111 PANTHER UNCHARACTERIZED 29 110 IPR007216 GO:0006402|GO:0030014
Trre2g02269 111 Gene3D - 27 111 IPR011989 -
Trre2g02269 111 Pfam Cell differentiation family, Rcd1-like 36 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02269 Trre-Chr2 18653757 18656176 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre2g02269 Rcd1 5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02269 K12606 - rvl:131329148 119.012